Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 861 a.a., ATP-dependent chaperone ClpB from Dechlorosoma suillum PS

 Score =  501 bits (1291), Expect = e-146
 Identities = 316/884 (35%), Positives = 491/884 (55%), Gaps = 68/884 (7%)

Query: 12  KLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQAI 71
           K   + + AL  A SL I   +  +   + L  LL+        +L +AG+ V  ++ A+
Sbjct: 5   KFTTKFQQALADAQSLAIGADNQFIDPSHLLLALLNQDDGGTASLLARAGVNVPPLRTAL 64

Query: 72  ASTYSREQVLDTYPAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTRADRYLSFK 131
               +R   ++ +     +  +L     LL+ T+ E            A  R D++++ +
Sbjct: 65  EQAIARLPKVEGHGGDVSIGRDLTN---LLNLTDKE------------AQKRGDQFIASE 109

Query: 132 LISLFEGINRENLKKHFAMILSDSAETA-VAKTDKNAANPLQAAAETPLG---------- 180
           +  L               +  D  ET+ +AK       PL+AA +   G          
Sbjct: 110 MFLL--------------ALTGDKGETSRIAKQYGLEKKPLEAAIDAVRGGQGVDSQEAE 155

Query: 181 -------RFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAM 233
                  ++C ++TE+A  G+LDPV+ R++E+   + IL RR KNNP+++GE GVGK+A+
Sbjct: 156 GQRESLKKYCVDLTERAAQGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAI 215

Query: 234 IEGLALRVVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIIL 293
           +EGLA R+V  +VP  L+  ++  LD+  L AGA  +GEFE+RLK V++ I +    IIL
Sbjct: 216 VEGLAQRIVNDEVPETLKGKKVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKDEGRIIL 275

Query: 294 FIDEAHTLIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQL 353
           FIDE HT++G+G  EG  DA N+LKPALARGEL  + ATT  EY+KY EKD AL RRFQ 
Sbjct: 276 FIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQK 335

Query: 354 VKLDEPTIDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLD 413
           V +DEP+++  + ILRGL   YE  H V ITD A+ AAAELS RYI+ R LPDKAID++D
Sbjct: 336 VLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLID 395

Query: 414 TACARIAINMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADE 473
            A ARI + + + P+ +  L+    Q ++E + +++ +    E   +R  ++ ++    +
Sbjct: 396 EAAARIKMEIDSKPEVMDKLDRRIIQLKIEREAVKKEK---DEASKKRFGLIEDEIAKLQ 452

Query: 474 AEKAALTQSWQQQKSLV-------ESIIALRAELM------ELSQAQEQDPDHLLVVRTA 520
            E + L + W+ +K+ V       E I  ++AE+       +L +  E     L  +   
Sbjct: 453 KEYSDLEEVWKAEKAQVHGAAHVKEEIDKIKAEIARLQREGKLEKVAELQYGKLPQLEAQ 512

Query: 521 LQEQYQALDAIDHAERLMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQA 580
           L+   +A +      +L+  QV A++IAEV++  TG+PV +M   E  K+  +   L Q 
Sbjct: 513 LKVAEKASEGGQQQNKLLRTQVGAEEIAEVVSRATGIPVSKMMQGERDKLLKMEDRLHQR 572

Query: 581 IKGQETAIERIHRHLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFL 640
           + GQ+ A+  +   +  +RA L  P RP G+FL +GP+GVGKTE    LAE L+  +  L
Sbjct: 573 VVGQDEAVRLVSDAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALAEFLFDSEDHL 632

Query: 641 TTINMSEYQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNI 700
             I+MSE+ EKH+V+RLIG+PPGYVGY EGG LTEA+R+ PYSV+LLDEVEKAHP+V N+
Sbjct: 633 IRIDMSEFMEKHSVARLIGAPPGYVGYEEGGTLTEAVRRKPYSVILLDEVEKAHPDVFNV 692

Query: 701 FYQGFDKGEIADGEGRVIDCQNIVFFLTSNLGYQTIVDYADEPAKLDE-ALYPELAAFFK 759
             Q  D G + DG+GR +D +N V  +TSNLG Q I   A +  +L + A+  E+ ++F+
Sbjct: 693 LLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMAGDDYQLIKLAVMGEVKSYFR 752

Query: 760 PALLARM-EVIPYLPLGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATR 818
           P  + R+ E + +  L ++ +  I R +L  LEK    +    + + +S +DE+      
Sbjct: 753 PEFINRIDEAVVFHSLDEKNIRNIARIQLGYLEKRV-AQLEMRLEVADSALDELAKAGFD 811

Query: 819 SENGARMLEAIIEGQLLPPVSLALLNKLAERAPVERIRLAAEAG 862
              GAR L+  I+  +  P++  +L       P + I ++ + G
Sbjct: 812 PIFGARPLKRAIQQHIENPLAKQILE--GNFGPKDTILVSCDEG 853