Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 848 a.a., Probable ATP-dependent protease ATP-binding subunit ClpC1 from Mycobacterium tuberculosis H37Rv

 Score =  442 bits (1138), Expect = e-128
 Identities = 298/865 (34%), Positives = 456/865 (52%), Gaps = 77/865 (8%)

Query: 19  LALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQAIASTYSR- 77
           LA E+A  L     H  +  E+ L  L+          L+  G+ ++ V+  +     + 
Sbjct: 15  LAQEEARML----NHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQG 70

Query: 78  EQVLDTYPAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTRADRYLSFKLISLFE 137
           +Q    +  F+P   ++L E  L  + +L    + +  I L  +   +   +  L+ L  
Sbjct: 71  QQAPSGHIPFTPRAKKVL-ELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKL-- 127

Query: 138 GINRENLKKHFAMILS--DSAETAVAKTDKNAANPLQAAAETPLGRFCTNVTEQARNGEL 195
           G     +++    +LS     E A A T          +    L +F  N+T  A  G+L
Sbjct: 128 GAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKL 187

Query: 196 DPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGKVPTQLQNVEL 255
           DPV+ RE E+  ++ +L RR KNNP+++GE GVGK+A++EGLA  +V G+VP  L++ +L
Sbjct: 188 DPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQL 247

Query: 256 YSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGNQEGGSDAAN 315
           Y+LDLG L AG+  +G+FE+RLK V+  I  +   IILFIDE HTL+G+G  EG  DAA+
Sbjct: 248 YTLDLGSLVAGSRYRGDFEERLKKVLKEIN-TRGDIILFIDELHTLVGAGAAEGAIDAAS 306

Query: 316 LLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQAVDILRGLNSVY 375
           +LKP LARGEL T+ ATT  EY+KY EKD AL RRFQ V++ EPT++  ++IL+GL   Y
Sbjct: 307 ILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRY 366

Query: 376 EKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINMTTPPKRLALLET 435
           E  H V ITD A+ AAA L+ RYI+ R LPDKAID++D A AR+ I   T P  L     
Sbjct: 367 EAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDL----- 421

Query: 436 LCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEKAALTQSWQQQKSLVESIIA 495
                              +E D +  +  R +E A +A      Q +++  SL      
Sbjct: 422 -------------------REFDEKIAEARREKESAIDA------QDFEKAASL------ 450

Query: 496 LRAELMELSQAQEQDPDHLLVVRTALQEQYQALDAIDHAERLMHPQVDADQIAEVIADWT 555
                        +D +  LV + A +E+      +D     +  +VD +QIAEV+ +WT
Sbjct: 451 -------------RDREKTLVAQRAEREKQWRSGDLD-----VVAEVDDEQIAEVLGNWT 492

Query: 556 GVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLLTARADLRRPGRPKGAFLLV 615
           G+PV ++   E  ++  +   L + I GQE A++ + + +   RA L+ P RP G+F+  
Sbjct: 493 GIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFA 552

Query: 616 GPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSRLIGSPPGYVGYGEGGVLTE 675
           GPSGVGKTE    LA  L+G    L  I+M E+ ++ T SRL G+PPGYVGY EGG LTE
Sbjct: 553 GPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTE 612

Query: 676 AIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGRVIDCQNIVFFLTSNLGYQT 735
            +R+ P+SVVL DE+EKAH E+ N   Q  + G + DG+GR +D +N V   TSNLG   
Sbjct: 613 KVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSD 672

Query: 736 IVDYA----------DEPAKLDEALYPELAAFFKPALLARM-EVIPYLPLGKEVLAQIVR 784
           I              ++  ++ + +  EL   F+P  L R+ ++I +  L +E + ++V 
Sbjct: 673 ISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVD 732

Query: 785 GKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEAIIEGQLLPPVSLALLN 844
             ++R+    K++ +  +V+ ++    +  R      GAR L   I+ ++   +S  +L 
Sbjct: 733 LMISRVAGQLKSK-DMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILF 791

Query: 845 KLAERAPVERIRLAAEAGEFIGEVA 869
           +      V  + +    GE  GE A
Sbjct: 792 EEVGPGQVVTVDVDNWDGEGPGEDA 816