Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 848 a.a., Probable endopeptidase ATP binding protein (chain B) ClpB (ClpB protein) (heat shock protein F84.1) from Mycobacterium tuberculosis H37Rv

 Score =  488 bits (1256), Expect = e-142
 Identities = 307/799 (38%), Positives = 453/799 (56%), Gaps = 45/799 (5%)

Query: 16  QSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVK---QAIA 72
           +++ AL  A        +PE+   + L  LL         +L+  G+E   V+   Q + 
Sbjct: 9   KTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATVRAETQRLL 68

Query: 73  STYSREQVLDTYPAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTRADRYLSFKL 132
               +     T P  S   +  +  A  L+ TEL+  E  S    +  L   D  ++  L
Sbjct: 69  DRLPQATGASTQPQLSRESLAAITTAQQLA-TELDD-EYVSTEHVMVGLATGDSDVAKLL 126

Query: 133 ISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAETPLGRFCTNVTEQARN 192
                G + + L++ F  +   +  T+          P   A    L ++ T++T +AR 
Sbjct: 127 TG--HGASPQALREAFVKVRGSARVTS----------PEPEATYQALQKYSTDLTARARE 174

Query: 193 GELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGKVPTQLQN 252
           G+LDPV+ R+NE+  +V +L RR KNNP+++GE GVGK+A++EGLA R+VAG VP  L++
Sbjct: 175 GKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRD 234

Query: 253 VELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSG-NQEGGS 311
             + +LDLG + AG+  +GEFE+RLK V+D IK S   II FIDE HT++G+G   EG  
Sbjct: 235 KTIVALDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAM 294

Query: 312 DAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQAVDILRGL 371
           DA N++KP LARGEL  V ATT  EY+K+ EKD AL RRFQ V + EP+++  + ILRGL
Sbjct: 295 DAGNMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGL 354

Query: 372 NSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINMTTPPKRLA 431
              YE  H V ITD AL AAA LS RYI+ R LPDKAID++D A +R+ + + + P  + 
Sbjct: 355 KDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEID 414

Query: 432 LLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEKAA-LTQSWQQQKSLV 490
            +E L  + ++E   L + +    E  +ERL  LR+ ELAD+ EK A LT  WQ +K+ +
Sbjct: 415 EVERLVRRLEIEEMALSKEE---DEASAERLAKLRS-ELADQKEKLAELTTRWQNEKNAI 470

Query: 491 ESIIALRAELMEL---SQAQEQDPDHLLVVRTA---LQEQYQALDAI-----DHAERLMH 539
           E +  L+ +L  L   S+  E+D D           + E  + LDA         + ++ 
Sbjct: 471 EIVRDLKEQLEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLK 530

Query: 540 PQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLLTAR 599
            +V  D IA+V++ WTG+P  ++   E  K+  +   LG+ + GQ+ A+  +   +  +R
Sbjct: 531 EEVGPDDIADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSR 590

Query: 600 ADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSRLIG 659
           A +  P RP GAF+ +GP+GVGKTE    LA+ L+  ++ +  I+MSEY EKHTV+RLIG
Sbjct: 591 AGVSDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIG 650

Query: 660 SPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGRVID 719
           +PPGYVGY  GG LTEA+R+ PY+VVL DE+EKAHP+V ++  Q  D+G + DG GR +D
Sbjct: 651 APPGYVGYEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVD 710

Query: 720 CQNIVFFLTSNLGYQTIVDYADEPAKLDEALYPELAAFFKPALLARM-EVIPYLPLGKEV 778
            +N +  LTSNLG               E +   + A FKP  + R+ +V+ +  L  E 
Sbjct: 711 FRNTILILTSNLG----------SGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEE 760

Query: 779 LAQIVRGKLARLEKLFKTR 797
           L +IV  +LA+L K    R
Sbjct: 761 LVRIVDIQLAQLGKRLAQR 779