Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 862 a.a., ATP-dependent chaperone ClpB (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  509 bits (1310), Expect = e-148
 Identities = 316/860 (36%), Positives = 480/860 (55%), Gaps = 48/860 (5%)

Query: 10  IAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQ 69
           I K   +S+ A+ +A S  +   H +V +E+    L+      V  +L++AG + D    
Sbjct: 3   INKFTEKSQQAIAEAQSTAVRLGHQQVDVEHAALALVRQEQGLVPRLLERAGYKPDAFAG 62

Query: 70  AIASTYSREQVLDTYPAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTRADRYLS 129
           A+      E  L   PA S        +  +  +  L QA +R+      A    D Y+S
Sbjct: 63  AL------EAALQKRPAVSG---PGAAQGQIYVTQRLNQALVRAQDF---AKRLKDEYVS 110

Query: 130 FK-LISLF---------EGINRE-NLKKHFAMILSDSAETAVAKTDKNAANPLQAAAETP 178
            + LI  F           + RE  L +   + + +    A   T +N  +  +A     
Sbjct: 111 VEHLICAFLEEPPSTDMGRVAREFGLTQDKLLAVLEDVRGAQRVTSQNPEDTYEA----- 165

Query: 179 LGRFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLA 238
           L ++  ++ E+AR G+LDPV+ R+ E+  +V IL RR KNNP+++GEAGVGK+A++EGLA
Sbjct: 166 LQKYGRDLVEEARKGKLDPVIGRDAEIRRVVRILSRRTKNNPVLIGEAGVGKTAIVEGLA 225

Query: 239 LRVVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEA 298
            R++ G VP  L+N  L++LD+G L AGA  +GEFE+RLK V+  ++++   I++FIDE 
Sbjct: 226 HRILKGDVPEGLKNRSLFALDMGALIAGAKYRGEFEERLKAVLKEVEKAEGRIVMFIDEL 285

Query: 299 HTLIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDE 358
           HT++G+G  +G  DA NLLKP LARGEL  + ATT  EY+KY EKDPAL RRFQ V +DE
Sbjct: 286 HTIVGAGKTDGAMDAGNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVVVDE 345

Query: 359 PTIDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACAR 418
           PT++  + ILRGL   +E  H V I+D A+  A  LS RYI+ RQLPDKAID++D A A 
Sbjct: 346 PTVEDTISILRGLRERFEVHHGVRISDSAIVEAVTLSHRYITDRQLPDKAIDLIDEAAAL 405

Query: 419 IAINMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELAD-EAEKA 477
           I   + + P  L  +     Q ++E + L R          ERL+ L N ELAD  A +A
Sbjct: 406 IRTEIDSLPAELDEVNRKVMQLEIEREALRRET---DAASRERLEKLEN-ELADLRASQA 461

Query: 478 ALTQSWQQQKSLVESIIALRAELMELSQAQEQDPDHLLVVRTA---------LQEQYQAL 528
            L   W+++K  ++++  ++ E+     A ++   +  + R A         L+ +  A 
Sbjct: 462 TLLAQWEREKGSIDAVRTIKEEIERTRLAIDEAERNYDLNRAAELKYSKLLELERKLAAA 521

Query: 529 DAIDHAERLMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAI 588
           +  D   RL+  +V  D +AE++A WTG+PV ++   E  K+  L  +L + + GQ+ A+
Sbjct: 522 ERGDDENRLLKEEVRPDDVAEIVARWTGIPVTRLLESEREKLLRLGDVLHERVVGQDEAV 581

Query: 589 ERIHRHLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEY 648
           + +   +L ARA L  PGRP G+F+ +GP+GVGKTE    LAE L+  +  +  I+MSEY
Sbjct: 582 QAVAEAVLRARAGLSDPGRPIGSFIFLGPTGVGKTELCKTLAESLFDSEDNIVRIDMSEY 641

Query: 649 QEKHTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKG 708
            EKH V+RLIG+PPGYVGY EGG LTEA+R+ PYSVVL DE+EKAH +V N+  Q  D G
Sbjct: 642 MEKHAVARLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNVLLQILDDG 701

Query: 709 EIADGEGRVIDCQNIVFFLTSNLGYQTIVDYADEPAK----LDEALYPELAAFFKPALLA 764
            + D  GR +D +N +  +TSN+G   ++D   +  +    + + +  E+   F+P  L 
Sbjct: 702 RLTDSHGRTVDFKNTIIIMTSNIGSSHLLDGITDEGEFRPGVRDRVMDEMRRHFRPEFLN 761

Query: 765 RM-EVIPYLPLGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGA 823
           R+ E++ + PL  E + +IV   L +L      R    V + ++  D I   A     GA
Sbjct: 762 RVDEIVMFRPLLPEQIGRIVELLLGKLRGRLAER-KITVDLSDAARDFIAESAYDPVYGA 820

Query: 824 RMLEAIIEGQLLPPVSLALL 843
           R L   ++  +  P++  L+
Sbjct: 821 RPLRRYLQTNVETPLARRLI 840