Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 857 a.a., ATP-dependent chaperone ClpB from Klebsiella michiganensis M5al

 Score =  511 bits (1316), Expect = e-149
 Identities = 326/866 (37%), Positives = 494/866 (57%), Gaps = 38/866 (4%)

Query: 12  KLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQAI 71
           +L  + +LAL  A SL +   +  +   + +  LL+     VR +L  AG+   +++  I
Sbjct: 5   RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVRPLLTSAGINAGELRTNI 64

Query: 72  ASTYSR-EQVLDTYPAFSPL--LVELLQEAWLLSSTELEQAELRSGAIFLAALTRADRYL 128
               SR  QV  T     P   LV +L     L+    +     S  +F+ A+  +   L
Sbjct: 65  EQALSRLPQVEGTGGDVQPSQDLVRILNLCDKLAQKRKDN--FISSELFVLAVLESRGTL 122

Query: 129 SFKLISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAETPLGRFCTNVTE 188
           +  L S   G    N+ +    +    +       D+ A +  QA     L +F  ++TE
Sbjct: 123 TDLLKSA--GATTANVSQAIEQMRGGESVN-----DQGAEDQRQA-----LKKFTVDLTE 170

Query: 189 QARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGKVPT 248
           +A  G+LDPV+ R+ E+   + +L RR KNNP+++GE GVGK+A++EGLA R+V G+VP 
Sbjct: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPE 230

Query: 249 QLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGNQE 308
            L+   + +LD+G L AGA  +GEFE+RLKGV++ + +    +ILFIDE HT++G+G  +
Sbjct: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290

Query: 309 GGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQAVDIL 368
           G  DA N+LKPALARGEL  V ATT  EY++Y EKD AL RRFQ V + EPT++  + IL
Sbjct: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPTVEDTIAIL 350

Query: 369 RGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINMTTPPK 428
           RGL   YE  H+V ITD A+ AAA LS RYI+ RQLPDKAID++D A + I + + + P+
Sbjct: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410

Query: 429 RLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELAD-EAEKAALTQSWQQQK 487
            L  L+    Q +LE   L++      E   +RLD+L N+ELAD E + + L + W+ +K
Sbjct: 411 ELDRLDRRIIQLKLEQQALKKE---SDEASIKRLDML-NEELADKERQYSVLEEEWKAEK 466

Query: 488 SLVESIIALRAELMELSQAQEQDPDHLLVVRTA------LQEQYQALDAIDHAE----RL 537
           + +     ++AEL +   A EQ      + R +      + E  + + A   +E    RL
Sbjct: 467 ASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQMAAATQSEGKTMRL 526

Query: 538 MHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLLT 597
           +  +V   +IAEV+A WTG+PV +M   E  K+  +   L   + GQ  A+E +   +  
Sbjct: 527 LRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRR 586

Query: 598 ARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSRL 657
           +RA L  P RP G+FL +GP+GVGKTE    LA  ++     +  I+MSE+ EKH+VSRL
Sbjct: 587 SRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRL 646

Query: 658 IGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGRV 717
           +G+PPGYVGY EGG LTEA+R+ PYSV+LLDEVEKAHP+V NI  Q  D G + DG+GR 
Sbjct: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRT 706

Query: 718 IDCQNIVFFLTSNLGYQTIVDY--ADEPAKLDEALYPELAAFFKPALLARM-EVIPYLPL 774
           +D +N V  +TSNLG   I +   A + + + + +   ++  F+P  + R+ EV+ + PL
Sbjct: 707 VDFRNTVVIMTSNLGSDLIQERFGALDYSHMKDLVLGVVSQSFRPEFINRIDEVVVFHPL 766

Query: 775 GKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEAIIEGQL 834
           G++ +A I + +L RL K  + R   EV + +  +  +         GAR L+  I+ Q+
Sbjct: 767 GEKHIASIAQIQLQRLYKRLEER-GYEVHLSDEALKLLSENGYDPVYGARPLKRAIQQQI 825

Query: 835 LPPVSLALLNKLAERAPVERIRLAAE 860
             P++  +L+   E  P + ++L  +
Sbjct: 826 ENPLAQQILS--GELIPGKEVQLVVK 849