Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 865 a.a., ATP-dependent Clp protease, ATP-binding subunit ClpB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  509 bits (1312), Expect = e-148
 Identities = 316/856 (36%), Positives = 478/856 (55%), Gaps = 39/856 (4%)

Query: 10  IAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQ 69
           I K   +S+ AL +A ++ +   H EV  E+  D L+      V  +L + G + +   +
Sbjct: 3   IGKFTEKSQQALAEAQNIAVRFGHQEVDAEHLADALVRQEQGLVPRLLDRMGQKPEAFAE 62

Query: 70  AIASTYSREQVLDTYPAFSP--LLVELLQEAWLLSSTE----LEQAELRSGAIFLAALTR 123
           A+     +   +   P  +P  + V     A L+ + +    L+   +    IF   L  
Sbjct: 63  ALERELGKRPAVSG-PGAAPGQIFVSKRLNAVLVKAQDFARQLKDEYVSVEHIFCVLLEE 121

Query: 124 ADRYLSFKLISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAETPLGRFC 183
               +  ++   F      +L +   + + +    +   T  N  +  +A     L ++ 
Sbjct: 122 PASTIMGRIAREF------SLSREKVLGVLEDVRGSQRVTSANPEDTYEA-----LQKYG 170

Query: 184 TNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVA 243
            ++ E+AR G+LDPV+ R+ E+  ++ IL RR KNNP+++GEAGVGK+A++EGLA R++ 
Sbjct: 171 RDLVEEARKGKLDPVIGRDAEIRRVIRILSRRTKNNPVLIGEAGVGKTAIVEGLAHRILK 230

Query: 244 GKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIG 303
           G VP  L+   L++LD+G L AGA  +GEFE+RLK V+  +++S   II+FIDE HT++G
Sbjct: 231 GDVPEGLKERGLFALDMGALIAGAKYRGEFEERLKAVLKEVEKSEGRIIMFIDELHTIVG 290

Query: 304 SGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQ 363
           +G  +G  DA+NLLKP LARGEL  + ATT  EY+KY EKDPAL RRFQ V +DEPTI+ 
Sbjct: 291 AGKTDGAMDASNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVLVDEPTIED 350

Query: 364 AVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINM 423
           A+ ILRGL   +E  H V I+D A+  A  LS RYI+ RQLPDKAID++D A A I   +
Sbjct: 351 AISILRGLKERFEVHHGVRISDSAIVEAVTLSHRYITDRQLPDKAIDLIDEAAALIRTEI 410

Query: 424 TTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELAD-EAEKAALTQS 482
            + P  L        Q ++E + L R   +      ERL+ L N ELAD  AE+ AL   
Sbjct: 411 DSLPADLDEANRKIMQLEIEREALRRETDVASR---ERLERLEN-ELADLRAEQTALLSQ 466

Query: 483 WQQQKSLVESIIALRAELMELSQAQEQDPDHLLVVRTA---------LQEQYQALDAIDH 533
           W+++K  ++ + +++ ++     A E+      + R A         L+ Q ++ +   H
Sbjct: 467 WEREKGSIDHVRSIKEDIERTRHAIEEAERAYDLNRAAELKYSRLLELERQLESAEKGGH 526

Query: 534 AE-RLMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIH 592
            E RL+  +V  D IAE++A WTG+PV ++   E  K+  L  +L + + GQE A++ + 
Sbjct: 527 DETRLLKEEVRPDDIAEIVARWTGIPVTRLLESEREKLLRLADVLHERVVGQEEAVDAVS 586

Query: 593 RHLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKH 652
             +L ARA L  P RP G+F+ +GP+GVGKTE    LAE L+  ++ +  ++MSEY EKH
Sbjct: 587 EAVLRARAGLSDPSRPIGSFIFLGPTGVGKTELCKTLAEALFDTEENIVRLDMSEYMEKH 646

Query: 653 TVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIAD 712
            V+RLIG+PPGYVGY EGG LTEA+R+ PYSVVL DEVEKAHP+V N   Q  D G + D
Sbjct: 647 AVARLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNTLLQILDDGRLTD 706

Query: 713 GEGRVIDCQNIVFFLTSNLGYQTIVDYADEPAK----LDEALYPELAAFFKPALLARM-E 767
             GR +D +N +  +TSN+G   ++D   E  +    + E +  EL   F+P  L R+ E
Sbjct: 707 SHGRTVDFRNTIIIMTSNIGSPYMLDGISEGGEFLSGVREKVMEELRRHFRPEFLNRVDE 766

Query: 768 VIPYLPLGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLE 827
            + + PL    +A+IV   L RL      R   ++ + +   D I   A     GAR L 
Sbjct: 767 TVLFKPLLPAQIARIVELLLGRLRGRLAER-KIDIRLGDVARDFIAKAAYDPVYGARPLR 825

Query: 828 AIIEGQLLPPVSLALL 843
             ++  +  P++  L+
Sbjct: 826 RYLQHNIETPLARKLI 841