Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 859 a.a., ClpB protein from Caulobacter crescentus NA1000

 Score =  513 bits (1322), Expect = e-149
 Identities = 327/855 (38%), Positives = 483/855 (56%), Gaps = 58/855 (6%)

Query: 16  QSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQAIASTY 75
           ++K A++ A SL + R H +   E+ L VLL+      R +++ AG   DQ+   + +  
Sbjct: 9   RAKQAVQSAQSLALARGHQQFAPEHILKVLLEEKDGLSRALIQSAGGRPDQLDGGVETLL 68

Query: 76  SREQVLDTYPA---FSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTRADRYLSFKL 132
           ++   +D         P    +  EA        E++   +G  F+      +R L   +
Sbjct: 69  AKTPRVDGAGGQLYMKPDTARVFAEA--------EKSAKAAGDAFVTT----ERLL---I 113

Query: 133 ISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAE--TPLGRFCTNVTEQA 190
               EG     L K  A + + S ETA     K        A E    L R+  ++T  A
Sbjct: 114 AIAKEGGEAAKLFKE-AGVSAQSLETAANAMRKGRTADSANAEEGYEALKRYARDLTAAA 172

Query: 191 RNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGKVPTQL 250
           R+G+LDPV+ R+ E+   + +L RR KNNP+++GE GVGK+A++EGLALR+V G VP  L
Sbjct: 173 RDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESL 232

Query: 251 QNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGNQEGG 310
           ++ +L SLD+G L AGA  +GEFE+RLK V+  +  +   IILFIDE HTL+G+G  +G 
Sbjct: 233 KDKKLLSLDMGSLIAGAKYRGEFEERLKAVLGEVTAAEGSIILFIDEMHTLVGAGKGDGA 292

Query: 311 SDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQAVDILRG 370
            DA+NLLKPALARGEL  V ATT  EY+K+ EKD AL RRFQ V + EPT++  V ILRG
Sbjct: 293 MDASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRG 352

Query: 371 LNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINMTTPPKRL 430
           L   YE  H V I+D A+ AAA LS RYI+ R LPDKAID++D A +R+ + + + P+ L
Sbjct: 353 LKEKYEVHHGVRISDSAIVAAATLSNRYIADRFLPDKAIDLVDEASSRVRMQIDSKPEEL 412

Query: 431 ALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELAD-EAEKAALTQSWQQQKSL 489
             ++    Q ++E + L +      +   E L+V    E+ D +     +T  W+ +K  
Sbjct: 413 DEIDRRLVQLKIEREALSKETDAASKQRLENLEV----EIDDLQFRSDEMTARWKAEKEK 468

Query: 490 V-------ESIIALRAELMELSQAQEQDPDHLLVVRTALQEQYQALDAIDH--------- 533
           V       E++  LRA+L    +A +           A Q QY  + A++          
Sbjct: 469 VGGAAQAREALDRLRADLANAQRAGD--------FARAGQIQYGEIPALERRLAEAEAGD 520

Query: 534 AERLMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHR 593
            + L    VDA+QIA V++ WTGVPV++M   E  K+  +   L   + GQ+ A+E +  
Sbjct: 521 TQALTPEVVDAEQIAAVVSRWTGVPVEKMLEGEREKLLKMEDELRGRVVGQDEALEAVSD 580

Query: 594 HLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHT 653
            +  ARA L+ P +P G+FL +GP+GVGKTE    LAE L+  +  +T ++MSEY EKH+
Sbjct: 581 AVRRARAGLQDPSKPIGSFLFLGPTGVGKTELTKSLAEFLFADEAAITRMDMSEYMEKHS 640

Query: 654 VSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADG 713
           VSRLIG+PPGYVGY EGG LTEAIR+ PY VVL DE+EKAHP+V N+  Q  D G + DG
Sbjct: 641 VSRLIGAPPGYVGYDEGGALTEAIRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDG 700

Query: 714 EGRVIDCQNIVFFLTSNLGYQTIVDYADEPAKLDEALYP----ELAAFFKPALLARM-EV 768
           +GR +D +N +  +TSNLG + +   + E  +  EA+ P     +   F+P  L R+ E+
Sbjct: 701 QGRTVDFRNTLIIMTSNLGAEYLA--SQEDGEDVEAVRPMVMNTVRGHFRPEFLNRIDEI 758

Query: 769 IPYLPLGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEA 828
           I +  L +  +  IVR +L R+EKL   R  A + ++   ++ +  +      GAR L+ 
Sbjct: 759 ILFKRLSRHNMGDIVRIQLQRVEKLLADRRMA-LALDAEALNWLADKGYDPVYGARPLKR 817

Query: 829 IIEGQLLPPVSLALL 843
           +I+ +L+ P++  LL
Sbjct: 818 VIQKELVDPIAKKLL 832