Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 906 a.a., ATPase from Burkholderia phytofirmans PsJN

 Score =  618 bits (1594), Expect = 0.0
 Identities = 364/879 (41%), Positives = 521/879 (59%), Gaps = 36/879 (4%)

Query: 4   IELPTLIAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLE 63
           I    L  KL A    ++E A + C  R +P V L ++L  LL  P SD+  + + AG+E
Sbjct: 3   ISRQALFGKLGATLFRSIESATAFCKLRGNPYVELVHWLHQLLQLPDSDMHRIARHAGIE 62

Query: 64  VDQVKQAIASTYSREQVLDTYPAFSPLLVEL-------LQEAWLLSSTELEQAELRSGAI 116
              +++ +A      + L   PA +  + ++       ++ AW+L++ +     +R GA 
Sbjct: 63  RTTLERDLA------RALAALPAGASSISDISHHIELAVERAWVLATLDFGDRRIR-GAW 115

Query: 117 FLAAL--TRADRYLSFKLISLFEGINRENLKKHFAMILSDSAETAVA---KTDKNAANPL 171
            LAAL  T   R +       F  I  +  +      +  S E++ +    TD +AA P 
Sbjct: 116 LLAALLGTPELRRVLLSASPAFARIPVDTPRDELIAWIDGSPESSDSPYDNTDFSAAAPG 175

Query: 172 QAAAETPLG-------RFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVG 224
           +A+   P G       ++C++++ +AR GE+D V  RE E+  ++DIL RRR+NNP++ G
Sbjct: 176 EASQALPAGSKNSPIEQYCSDLSARARAGEIDIVTGREQEIRTIIDILLRRRQNNPLLTG 235

Query: 225 EAGVGKSAMIEGLALRVVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAI 284
           EAGVGK+A++EGLAL +  G VP  L +V L +LD+G L AGAS+KGEFE RLKGV++A 
Sbjct: 236 EAGVGKTAVVEGLALAIANGDVPPALADVRLMTLDVGALLAGASMKGEFESRLKGVLEAA 295

Query: 285 KQSPKPIILFIDEAHTLIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKD 344
            +S  PIILF+DE HTL+G+G Q G  DAANLLKPALARG +  + ATTW EYK++ EKD
Sbjct: 296 LRSKTPIILFVDEIHTLVGAGGQAGTGDAANLLKPALARGAVRMIGATTWSEYKRHIEKD 355

Query: 345 PALTRRFQLVKLDEPTIDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQL 404
           PALTRRFQ++++ EP    A+D++RGL   + K H V++ D+A++AA  LS RYI  RQL
Sbjct: 356 PALTRRFQVLQVPEPQEAAAIDMVRGLADTFSKHHGVIVRDEAIRAAVTLSHRYIPSRQL 415

Query: 405 PDKAIDVLDTACARIAINMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDV 464
           PDKAI +LDTACAR+A++   PP+ L  +       ++E  +LE+   +G   + E L  
Sbjct: 416 PDKAISLLDTACARVALSQHAPPRELQSVRQRLQAARVECGLLEQEARIGLHAE-EALSA 474

Query: 465 LRNQELADEAEKAALTQSWQQQKSLVESIIALRAELMELSQAQEQDPDHLLVVRTALQEQ 524
            R +      E++A+   W+ Q +  +++ + R  +  L+Q      D +  + T  Q +
Sbjct: 475 ARARIGTLSTEESAIDAHWRAQLAAAQALASARDAI--LTQPAPDQADVVPSLATLGQLE 532

Query: 525 YQALDAIDHAERLMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQ 584
           +  LD +     L+ P+VD   IAE+++DWTG+PV +M T+E+  +  L   L   + GQ
Sbjct: 533 HSLLD-LQGETPLVFPEVDETVIAEIVSDWTGIPVGRMVTNEVAAVRALPETLAARVIGQ 591

Query: 585 ETAIERIHRHLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTIN 644
              + +I   + TARA L  P +P G FLL GPSGVGKTET + LAE LYGG+Q L TIN
Sbjct: 592 SDPLRQIGERVQTARAGLTDPRKPLGVFLLAGPSGVGKTETALALAEALYGGEQNLITIN 651

Query: 645 MSEYQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQG 704
           MSEYQE HTVS L G+PPGYVGYGEGGVLTEA+R+ PY+VVLLDE+EKAH +V  +F+Q 
Sbjct: 652 MSEYQEAHTVSGLKGAPPGYVGYGEGGVLTEAVRRRPYAVVLLDEIEKAHHDVHEMFFQV 711

Query: 705 FDKGEIADGEGRVIDCQNIVFFLTSNLGYQTIVD------YADEPAKLDEALYPELAAFF 758
           FDKG + DG+GR ID +N    LTSN G +           A +   L EAL PEL   F
Sbjct: 712 FDKGYMEDGDGRYIDFRNTTILLTSNAGSELTASLCADATLAPDQDALREALNPELLKVF 771

Query: 759 KPALLARMEVIPYLPLGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATR 818
             A L R+ V+PY PL    LA IVR  + R+ +     +   +   E +ID I+SR   
Sbjct: 772 PAAFLGRVTVVPYRPLVHASLASIVRLHMNRVVQRMADSHGIALHYNEQVIDYIVSRCLV 831

Query: 819 SENGARMLEAIIEGQLLPPVSLALLNKLAERAPVERIRL 857
            E GAR+L   IE  +LP +S   L+  + +  +  I +
Sbjct: 832 QETGARVLIGFIEQHVLPRLSALWLDAFSSKRVLSSIEI 870