Pairwise Alignments

Query, 257 a.a., type IV secretion protein DotU from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., Inner membrane protein DotU from Pseudomonas fluorescens FW300-N2E2

 Score = 49.7 bits (117), Expect = 6e-11
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 2/87 (2%)

Query: 95  YILCAFLDESVMGTEWGASSLWAEHSMLSRFHNETWGGEKVFTILSRLEGEPHRYQALLA 154
           Y   A +DE+++ + W     W +H + SR +     GE++   + +L  E       LA
Sbjct: 80  YAFVALVDETLLFSPWPGQLAWQQHPLESRMYASRQAGERLPAAIKKLLDEQMPGTRDLA 139

Query: 155 FIY-HCLILGFEGKYRVMEGGQAEREK 180
            +Y  CLILGF+G+ R  E GQ + EK
Sbjct: 140 NVYLQCLILGFQGRLR-GEPGQVQHEK 165