Pairwise Alignments

Query, 257 a.a., type IV secretion protein DotU from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., Outer membrane protein ImpK/VasF, OmpA/MotB domain from Pseudomonas fluorescens FW300-N2E2

 Score =  127 bits (318), Expect = 3e-34
 Identities = 69/214 (32%), Positives = 120/214 (56%)

Query: 37  NVLIDAATPLFGLSLRVRTLTECDNIEQIYRQTIEEIKAIEIELTEQGYEHAILMAYRYI 96
           N L+ AA+ L    ++++   E ++++ +  +    ++  E    + G E++ L+A RY+
Sbjct: 59  NPLVAAASGLLSQMVQLKHGREREDLQALKGELRRGLEQFEACALQDGVENSQLIAARYV 118

Query: 97  LCAFLDESVMGTEWGASSLWAEHSMLSRFHNETWGGEKVFTILSRLEGEPHRYQALLAFI 156
           LC+ +DE+++ T WG    W++ S+LS FHNET+GGEKVF +L RL   P ++ ++L  +
Sbjct: 119 LCSAIDEAIVTTPWGRGGGWSQISLLSTFHNETFGGEKVFQLLERLSKNPIKHLSMLELL 178

Query: 157 YHCLILGFEGKYRVMEGGQAEREKVISRLHQLLSSLEESEPQDLTRPTDHVVRAKYTLSR 216
           Y CL LGFEGKYRV   G  E E     L++L+       P++L+   +    A+    R
Sbjct: 179 YLCLSLGFEGKYRVQTRGTLELESRRDALYRLICQARGDIPRELSPRWEGYDGARRNPVR 238

Query: 217 QMPVWSVFAGFIVLWVGLFLGYSYVLHSKSSDVL 250
            +P W+V    +V    ++  +++VL  +   VL
Sbjct: 239 IVPAWTVAVFTLVCLGVMYSSFAWVLGEQRRSVL 272