Pairwise Alignments

Query, 444 a.a., type VI secretion system baseplate subunit TssK from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., Uncharacterized protein ImpJ/VasE from Pseudomonas fluorescens FW300-N2E2

 Score = 57.0 bits (136), Expect = 1e-12
 Identities = 78/317 (24%), Positives = 136/317 (42%), Gaps = 26/317 (8%)

Query: 7   VIWNEGLFIKPQHFQQQQRYTEYCLDERLSTVSRYLYGISELSLNPEYLSFGRIAIERAV 66
           V W+EG+ + PQHFQ Q    E          + + +G+S+L ++P  LS G++ + +  
Sbjct: 8   VCWHEGMQLLPQHFQLQGLRAEALAAYFAGACNPWFWGVSQLEVDPSALSAGQVRLLQLQ 67

Query: 67  GVMPDGTTFRI------PQEDHLPDALEVTDASLANQIVYLAV-PL-RSESLMEINWPEE 118
           G +PDG    +      P E  + +A++ TD   A   VYLAV PL R+  L+ +    +
Sbjct: 68  GTLPDGLPVNLQAGVGPPLELDIGEAIDKTDD--ATVTVYLAVSPLWRAGQLVPLKGRLQ 125

Query: 119 RGTGRYVSRRLEVRDVHS-VQGDTTTIDVSPVRLQLMLEREDRSAYASIAIGRILEKRPD 177
              G        + D+ S    ++ T+     RL   L + D     SI +  +L  R +
Sbjct: 126 SVVGE------ALPDLTSGAFPESITVWRPNPRLCTQLSKAD-----SICL-PLLRIRKE 173

Query: 178 GSVVLDPDFIPCHLNVVGISALHRFINEMSGLMRERAKNIAQRI-SSPAQGGVADVSDF- 235
           G       + P    ++  SAL R +  +    RE+   +A R+  + A G   D  +  
Sbjct: 174 GGGFWRVPYTPPTPILLPESALGRRVAGVCARAREKCMFLAGRLRQAQAAGNQDDAMEIR 233

Query: 236 MLLQALNRLQPQMKHLAELRSLHPERLFECLSCVCGELATFTDESRLPPSLPSYNHDSPS 295
             L AL    P+++     R   P+ L+  L  + G  +     + +P   P  +     
Sbjct: 234 RQLTALWARLPEVEGALNTRVATPQALYGLLLGLAGSWSALDPLAGVPAFAP-LDFLELQ 292

Query: 296 HSFQPLIRSLRQSLSVV 312
             ++PL+  L  +L +V
Sbjct: 293 RGYEPLLDWLETTLELV 309