Pairwise Alignments

Query, 444 a.a., type VI secretion system baseplate subunit TssK from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., Uncharacterized protein ImpJ/VasE from Pseudomonas fluorescens FW300-N2E2

 Score =  376 bits (966), Expect = e-109
 Identities = 196/440 (44%), Positives = 289/440 (65%), Gaps = 2/440 (0%)

Query: 5   NRVIWNEGLFIKPQHFQQQQRYTEYCLDERLSTVSRYLYGISELSLNPEYLSFGRIAIER 64
           NRV+W+EG+FI  QHFQQ  RY E  +D R   +S   +G SEL ++   L+ G++AI  
Sbjct: 5   NRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGAWGFSELLIDQGLLAQGKLAIIS 64

Query: 65  AVGVMPDGTTFRIPQEDHLPDALEVTDASLANQIVYLAVPLRSESLME-INWPEERGTGR 123
           A G++PDGT F IPQ+D  P  L V D +L + +VYLA+PL+     + ++  E+ G  R
Sbjct: 65  ARGLLPDGTPFNIPQDDLAPTPLNVDD-NLRDGLVYLALPLKRAGARDTVDEGEDLGAAR 123

Query: 124 YVSRRLEVRDVHSVQGDTTTIDVSPVRLQLMLEREDRSAYASIAIGRILEKRPDGSVVLD 183
           YVS+  EVRD ++   +   + +    L+L+ E++    YA+I + RI EKR D ++VLD
Sbjct: 124 YVSQVCEVRDDNAPFENRAPVALGSRALRLLTEQDGIGDYAAIGVVRIKEKRADRALVLD 183

Query: 184 PDFIPCHLNVVGISALHRFINEMSGLMRERAKNIAQRISSPAQGGVADVSDFMLLQALNR 243
             +IP  L+V+    L  F +E+ GL+ +R + +A R+ +   GG ++++DFMLLQ +NR
Sbjct: 184 DTYIPPLLDVIASKPLAAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQLVNR 243

Query: 244 LQPQMKHLAELRSLHPERLFECLSCVCGELATFTDESRLPPSLPSYNHDSPSHSFQPLIR 303
            QP ++HL++L  LHPER +  L  + GE +TFT   R P   P Y HD  + S+ P+++
Sbjct: 244 AQPLIQHLSQLSPLHPERFYSELVSLAGEFSTFTASGRRPQPYPPYQHDDLALSYAPVMQ 303

Query: 304 SLRQSLSVVLEPRAVSIQLDKRKYGLMVAPIHDPQLMESAEFIIAVKARMPLDELRRLFT 363
           +LR++LS++++ +A  I + ++ YG+ VA + D  L++SA FI+ V+A +P + LR  F 
Sbjct: 304 ALREALSMLIDSKATPIPIVEKAYGIHVAMLADKTLLDSASFILVVRADVPAETLRGRFG 363

Query: 364 QQTKVASVEKIRELISLQLPGIPLTPLPVAPRQLPYHAGYTYYQLDKTSAAWAMLTHSSG 423
           QQ+KV SVE IR+L++LQLPGI L PLPVAPRQLPYHAG TYY+LD+ S  W  L++S G
Sbjct: 364 QQSKVGSVEHIRDLVNLQLPGIGLLPLPVAPRQLPYHAGSTYYELDRGSDHWQQLSNSGG 423

Query: 424 FAFHVAAAFDDLELQFWAIR 443
           FAFH+A  F  L L FWAIR
Sbjct: 424 FAFHIAGQFPGLNLAFWAIR 443