Pairwise Alignments

Query, 444 a.a., type VI secretion system baseplate subunit TssK from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., Uncharacterized protein ImpJ/VasE from Pseudomonas fluorescens FW300-N2E2

 Score =  310 bits (794), Expect = 6e-89
 Identities = 163/442 (36%), Positives = 261/442 (59%), Gaps = 4/442 (0%)

Query: 5   NRVIWNEGLFIKPQHFQQQQRYTEYCLDERLSTVSRYLYGISELSLNPEYLSFGRIAIER 64
           ++VIW EG+ ++PQH Q   RY ++ L  R   ++ Y +G   L ++ ++L+ G++ + +
Sbjct: 4   DKVIWQEGMLLRPQHLQHNDRYFDHQLKVRTRLLASYAWGFLALEIDLQFLNMGQLVVSQ 63

Query: 65  AVGVMPDGTTFRIPQEDHLPDALEVTDASLANQIVYLAVPLRSESLMEINWPEERGT-GR 123
           A GV+PDG+ F +      P  LEV  ++ +N  +YLA+PL + + +E   PE+     R
Sbjct: 64  ASGVLPDGSLFELGGNTE-PLVLEVP-SNTSNAPIYLALPLVTGNHIESRRPEQSDVLAR 121

Query: 124 YVSRRLEVRDVHSVQGDTTTIDVSPVRLQLML-EREDRSAYASIAIGRILEKRPDGSVVL 182
           Y     +V D ++     + I      L+L+L E++   A+  + +  +L+   DG + L
Sbjct: 122 YTIYDAQVTDSNAGDSGGSQISCGRPNLRLLLGEQQSDHAFVKLKLCEVLDTTADGVIRL 181

Query: 183 DPDFIPCHLNVVGISALHRFINEMSGLMRERAKNIAQRISSPAQGGVADVSDFMLLQALN 242
           DPDF+P  +       L   + E+ G++  R  ++A+RI    + G A V DFM+LQ +N
Sbjct: 182 DPDFVPTFIQARSSHYLLSCLKEIIGMLAHRGDSLAERIRFNGKAGGAQVGDFMMLQLIN 241

Query: 243 RLQPQMKHLAELRSLHPERLFECLSCVCGELATFTDESRLPPSLPSYNHDSPSHSFQPLI 302
           R +  ++H  +L  +HPE L+  L  + GELATF+ +S+ PP    Y H      F+ L+
Sbjct: 242 RSELLLRHYLDLEQVHPETLYRMLLALLGELATFSSDSKRPPRTNRYQHSDQGACFRSLM 301

Query: 303 RSLRQSLSVVLEPRAVSIQLDKRKYGLMVAPIHDPQLMESAEFIIAVKARMPLDELRRLF 362
           +++RQ LS+VLE  A+ +QL  R+YG+ V+P+ D  L+++A F++A  A    +ELR   
Sbjct: 302 QAIRQVLSMVLEQHAIELQLQPRQYGITVSPMQDLTLLDTASFVLAASANCDSEELRHRL 361

Query: 363 TQQTKVASVEKIRELISLQLPGIPLTPLPVAPRQLPYHAGYTYYQLDKTSAAWAMLTHSS 422
               KV SVE+IR+L++L LPGI + PLPVAPRQ+ +HA  TY+ L+ +S   A L  S+
Sbjct: 362 PSNLKVGSVERIRQLVNLHLPGIKIRPLPVAPRQIAFHANKTYFILEPSSEDLAQLKRSA 421

Query: 423 GFAFHVAAAFDDLELQFWAIRS 444
           GFAFHV   F +LEL FWAIR+
Sbjct: 422 GFAFHVCGDFAELELNFWAIRN 443