Pairwise Alignments

Query, 444 a.a., type VI secretion system baseplate subunit TssK from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., type VI secretion protein, VC_A0114 family from Pseudomonas stutzeri RCH2

 Score =  328 bits (840), Expect = 3e-94
 Identities = 166/441 (37%), Positives = 270/441 (61%), Gaps = 4/441 (0%)

Query: 5   NRVIWNEGLFIKPQHFQQQQRYTEYCLDERLSTVSRYLYGISELSLNPEYLSFGRIAIER 64
           ++V+W EG+ ++PQHFQQ  RY ++ L  R   +  Y +G   L ++ ++L+ G++ + +
Sbjct: 4   HKVVWQEGMLLRPQHFQQSDRYYDHQLKARTQKLGSYAWGFFNLEIDRQFLNMGKLVLSQ 63

Query: 65  AVGVMPDGTTFRIPQEDHLPDALEVTDASLANQIVYLAVPLRSESLMEINWPEERGT-GR 123
           A G++PDGT F +  E   P AL++   +  +  VYLA+PL + + +E   PE++    R
Sbjct: 64  ASGILPDGTLFELGSERE-PLALDIPP-NTGSTPVYLALPLVTGNHIETRRPEQKDVLAR 121

Query: 124 YVSRRLEVRDVHSVQGDTTTIDVSPVRLQLML-EREDRSAYASIAIGRILEKRPDGSVVL 182
           Y +  LEV D ++    T+ +       +L+L E++   AY  + +  +L+  PDG + L
Sbjct: 122 YTAHELEVADSNAGDSSTSQVSTGLPDFRLLLGEQQSDQAYVKLQLCEVLDTTPDGVISL 181

Query: 183 DPDFIPCHLNVVGISALHRFINEMSGLMRERAKNIAQRISSPAQGGVADVSDFMLLQALN 242
           DP+FIP ++N      L   + E+  ++  R   +A+RIS+  + G A+V DFM+LQ +N
Sbjct: 182 DPEFIPTYVNFQASGYLLSCLKEVISMLAHRGDTLAERISATGKVGGAEVGDFMMLQLIN 241

Query: 243 RLQPQMKHLAELRSLHPERLFECLSCVCGELATFTDESRLPPSLPSYNHDSPSHSFQPLI 302
           R +P ++H   +  +HPE+++  L  + GELATF+ ES+ P     Y H     SF+ L+
Sbjct: 242 RHEPVLRHYLGVEQVHPEQIYRDLLGLLGELATFSSESKRPRLDGRYQHSDQGASFRKLM 301

Query: 303 RSLRQSLSVVLEPRAVSIQLDKRKYGLMVAPIHDPQLMESAEFIIAVKARMPLDELRRLF 362
            ++RQ LS+VLE  A+ + L +R+YG+ V+P+HD +L+ +A F++A  A+   + LR   
Sbjct: 302 DAIRQVLSMVLEQHAIELLLQQRQYGIQVSPLHDHKLLGTASFVLAASAQCDSETLRTRL 361

Query: 363 TQQTKVASVEKIRELISLQLPGIPLTPLPVAPRQLPYHAGYTYYQLDKTSAAWAMLTHSS 422
               K+  VE+IR+L++L LPGI L PLPVAPRQ+P+HAG TY+ L+ ++   A L  S 
Sbjct: 362 PAHLKIGPVERIRQLVNLHLPGIRLKPLPVAPRQIPFHAGKTYFALELSAEDQAQLERSG 421

Query: 423 GFAFHVAAAFDDLELQFWAIR 443
           GFAFHV+  F  LEL+FWA+R
Sbjct: 422 GFAFHVSGDFTGLELKFWAVR 442