Pairwise Alignments

Query, 444 a.a., type VI secretion system baseplate subunit TssK from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., type VI secretion system baseplate subunit TssK from Rahnella sp. WP5

 Score =  151 bits (382), Expect = 4e-41
 Identities = 117/443 (26%), Positives = 209/443 (47%), Gaps = 11/443 (2%)

Query: 6   RVIWNEGLFIKPQHFQQQQRYTEYCLDERLSTVSRYLYGISELSLNPEYLSFGRIAIERA 65
           R +W++G F+ PQ FQQQ R+  +  D          +G+ + + +   L+  R+   R 
Sbjct: 5   RPLWSDGAFLAPQQFQQQARWDAFVSDRVAHMALANPWGVIDATFDIGSLALSRLNALRL 64

Query: 66  VGVMPDGTTFRIPQEDHLPDALEVTDASLANQI-VYLAVPLRSESLMEINWPEERGTGRY 124
               PDGT       D+LP A +++  S  + + V LA+PL S +    N  + + + R 
Sbjct: 65  KVRFPDGTLIDTELADNLPPACDLSAISDRDSVDVVLALPLLSAN--GGNLDDGQDSERP 122

Query: 125 VSRRLEVRDVHSVQG-DTTTIDVSPVRLQLMLEREDRSAYASIAIGRILEKRPDGSVVLD 183
              + E   V  + G + T + +    + L    ++ SAY +  + R++ +   G    D
Sbjct: 123 RRWQQEWVTVQELSGHERTELAIQRYAITLRFAHQENSAYLTCPVVRLV-RNAQGQWTPD 181

Query: 184 PDFIPCHLNVVGISALHRFINEMSGLMRERAKNI-AQRISSP---AQGGVADVSDFMLLQ 239
            +FIP  L++    A+   + ++   ++ R + + A R  S    A   VADVS F LL 
Sbjct: 182 AEFIPPMLSLSSSPAVLTELGDLIHRLQARRRRLMAMRRESNERMADFAVADVSLFWLLN 241

Query: 240 ALNRLQPQMKHLAELRSLHPERLFECLSCVCGELATFTDESRLPPSLPSYNHDSPSHSFQ 299
           ALN  +P +  L +  + HPE  +  L  + G L TF+ E +    +P Y H++P + F 
Sbjct: 242 ALNSAEPVLMELYQSPARHPELFYRELVRLAGSLLTFSLEHKAE-DIPLYQHNAPENVFP 300

Query: 300 PLIRSLRQSLSVVLEPRAVSIQLDKRKYGLMVAPIHDPQLMESAEFIIAVKARMPLDELR 359
           PL   L   L   L  R V+I+L           +HD +L + A+F ++V++ +P   L+
Sbjct: 301 PLFTLLDALLEASLPSRMVAIELTHEGQ-FWTGSLHDSRLRDGADFYLSVRSSIPNHLLQ 359

Query: 360 RLFTQQTKVASVEKIRELISLQLPGIPLTPLPVAPRQLPYHAGYTYYQLDKTSAAWAMLT 419
             F    K  S E + +++++ L G+ +  L   P  +P      Y+ LD  SAA   + 
Sbjct: 360 TQFPLLCKAGSFEDVSDVVNVALNGVVMKALSHVPAAIPLRLENQYFALDLNSAAAQAML 419

Query: 420 HSSGFAFHVAAAFDDLELQFWAI 442
            +   AF+   +  +++L+ +A+
Sbjct: 420 DAGNCAFYTPGSLGEIKLELFAV 442