Pairwise Alignments

Query, 338 a.a., type VI secretion system baseplate subunit TssG from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., Uncharacterized protein ImpH/VasB from Pseudomonas fluorescens FW300-N2E2

 Score = 70.1 bits (170), Expect = 8e-17
 Identities = 71/258 (27%), Positives = 104/258 (40%), Gaps = 5/258 (1%)

Query: 69  FSPSDVMALEARDDERWVMLTNFFGLSGAQSPLPGFILEQLVTEEPGGYKQP--FLDFFN 126
           F+ S+V +L         + T  FGL G   PLP    E L          P  FLD F 
Sbjct: 65  FAASEVESLGQEPGLPPTLTTPIFGLGGPDGPLPYAYQEWLQQRARAKDHAPAEFLDLFQ 124

Query: 127 NRLINLVYRVWRKYRYYVRFQPGAQDVFSAQLFALVGLGDPDLRGETPINWCKMLAYAGT 186
           +RL++L+Y+V RK+R  + F         AQL AL GL    L+         +LA    
Sbjct: 125 HRLLSLLYKVMRKHRIALGFTAPGSSAVHAQLRALTGLLPKALQERQAAPDSAVLACTAL 184

Query: 187 LAGRSRSPQVVAGIIAHCFDLP-DVSIRQWVRRRVSIDRSQQLALGKQNARLGMDTVIGE 245
            A   RS    A I+   F LP +++  +   R +      +L  G +N  LG + V G 
Sbjct: 185 YADGRRSLDGFAAIVREQFGLPVELTAYEGGWREIPPASRSRLQPGGRNLCLGRNAVAGS 244

Query: 246 SVIDCSGKFIICIKRLSRSRFADFLPSGKEYQPLCKLVEFILREQMAYDLELAMDEREAP 305
            V D      + +  L+  + +  LP+G+ +  L  L        +  D  L +  R A 
Sbjct: 245 HVWDEHAGVRLTLGPLTTGQASGLLPNGETHPLLASLYALYFGPDL--DCTLVLLIRGAG 302

Query: 306 LFCLDTRQNIALGWTSFL 323
              LD +    L W   L
Sbjct: 303 PLQLDRQAAPRLNWNGGL 320