Pairwise Alignments

Query, 338 a.a., type VI secretion system baseplate subunit TssG from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., Protein of unknown function DUF1305 from Pseudomonas syringae pv. syringae B728a

 Score =  110 bits (275), Expect = 5e-29
 Identities = 88/327 (26%), Positives = 144/327 (44%), Gaps = 26/327 (7%)

Query: 15  DPAQASPLSLPGNVREYNFYQLVELLQKLADINP--ESEEWERDCRLVFSANPSLGFSPS 72
           D A+A P         + F+QLV LL+     N   + E    +  L F +  SL F  S
Sbjct: 14  DQARAEP-------HRFEFFQLVRLLRLHYSRNGRMDLETRPHEDPLRFRSQLSLNFPAS 66

Query: 73  DVMALEARDDERWV--------MLTNFFGLSGAQSPLPGFILEQLVTEE---PGGYKQPF 121
           +V  L+   + +          +   F GL G    LP    E L+             F
Sbjct: 67  EVSDLQFEREGKLSAAGLPLSEVQVTFMGLVGPSGVLPRPYTELLIDRHIQYRDDAAHAF 126

Query: 122 LDFFNNRLINLVYRVWRKYRYYVRFQPGAQDVFSAQLFALVGLGDPDLR-----GETPIN 176
           LD F++R+  L Y  W+KY++Y+ ++      F   L  LVG G   L+     GE+P+ 
Sbjct: 127 LDIFSHRMTTLFYEAWQKYKFYIEYERNGTSNFDRYLLNLVGFGPEGLKQKFDKGESPLR 186

Query: 177 WCKMLAYAGTLAGRSRSPQVVAGIIAHCFDLPDVSIRQWVRRRVSIDRSQQLALGKQNAR 236
                 ++G  A + R+   +  +++  F LP   I+Q+  R + +D SQ   LG++NA 
Sbjct: 187 RELFSYFSGMFAQKPRNALNLEVMLSFYFSLP-FKIQQFAGRWLKLDSSQCTQLGRKNAV 245

Query: 237 LGMDTVIGESVIDCSGKFIICIKRLSRSRFADFLPSGKEYQPLCKLVEFILREQMAYDLE 296
           LG   V G  V D      I +  L  + +  F P  ++YQ L +LV F +  ++ + + 
Sbjct: 246 LGQSAVAGNRVWDYQSCVRIEMGPLELADYQRFQPGTEDYQKLVELVRFYIGAELDFQIA 305

Query: 297 LAMDEREAPLFCLDTRQNIALGWTSFL 323
             +     P+  L  + N++LGW  +L
Sbjct: 306 PELKREAVPVARLGRQGNVSLGWLGWL 332