Pairwise Alignments

Query, 589 a.a., type VI secretion system baseplate subunit TssF from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., Protein ImpG/VasA from Pseudomonas fluorescens FW300-N2E2

 Score =  234 bits (597), Expect = 8e-66
 Identities = 199/616 (32%), Positives = 310/616 (50%), Gaps = 64/616 (10%)

Query: 6   YFREELAFLKEQGKEFTEIHPQLSRFLH---GRTTDPDVERLLEGFAFLTARLREKVEDE 62
           Y++ EL +L+  G  F E +P+++R L    G   DP VERLLEGFA L ARL+ +++D+
Sbjct: 12  YYQRELTWLRHAGSLFAERYPKVARRLELSPGECPDPHVERLLEGFALLAARLQRRLDDD 71

Query: 63  FPELTHSIINMLWPNYLRPIPSMSVVAFEPDKS---VSEKQVIPRNTQLDSKPVFGTACH 119
           + E + +++  L+P  +RP+PS ++V FEPD S   ++E   +PR+T L      G + H
Sbjct: 72  YAEFSDALLEQLYPLAMRPLPSCAIVQFEPDPSKGNLNEGYPLPRDTPLFVTTDKGQSIH 131

Query: 120 FNTCRDVALYPMQCQG---VHAEHT-------REATTIQISLRMLGDMTVGDAKLDTVRF 169
           F T   V L+P++      + ++ T       R  + +++ LR LG+       +D++R 
Sbjct: 132 FRTTAAVHLWPVEISEALLLGSDETQALTGVVRARSALRLELRCLGESQWSTLGIDSLRV 191

Query: 170 YLGGDKYSSQTLYLWLHHYLQKMTIEV-QGVEFALPADAF---STVGFSSDQALLPYPKN 225
           +L     +S  +   L+  L    IEV  G   ++PA        VGF++DQ LLP    
Sbjct: 192 HLA----ASPIINAGLYDLLGAHAIEVLAGAPGSVPASLTGLPQIVGFANDQVLLPDEDG 247

Query: 226 VYDGYRILQEYLSFPEAFHFFDVKGFAKALPKAVSGDFTLRIHFSKTLPADTR--VRQDN 283
           V+ G R+L EY +FP+ F FFD+      L  A S   +L ++     P  +R  ++  +
Sbjct: 248 VHPGMRLLAEYFAFPDKFGFFDL-----PLAGATSDSPSLYLYIVFDRPPTSRLPLQASD 302

Query: 284 FQLYCTPVINLFEHDADPIDLTGRRSEYRIVPSSRYPAHYEIFSVDQVVGWQDTQSEGKR 343
             L CTPVINLF   ++P+   G RSEYR+V  S      EI S+    G +   S+G  
Sbjct: 303 IALGCTPVINLFPRTSEPLRPDGTRSEYRLVADSHRENSVEIHSIR---GMRAMSSQG-- 357

Query: 344 IRGEKRIYSSFESFQHEVERVRHRQALYYRTRVKESIRGD--GFDSFISFVRGD-ETLSM 400
           +R     Y S    QH  +     Q  Y+  R    +  +  G D  +S V    + L+ 
Sbjct: 358 VRKVPAYYGS----QHGSD-----QTCYWHARRVSGMSPNRLGTDLMVSLVDTQFDPLAE 408

Query: 401 GVDEAVSIKLTCTNRLLPLELGVGDICVATDSSPPFATFKNITVPSQSLRPVLDGSLLWT 460
             D +++ +L CTNR L   L  G   +  +   P A  +    PS    P LDG   W 
Sbjct: 409 TRDYSLTAELLCTNRHLAQSLPAG-TPLGFERPGPVAWARLRNPPSPQSLPRLDGESRWR 467

Query: 461 LISNLSLNYLSLL----SKDALSCVLRAYDFR--ALVDRQAERVARMRLDGIVKIESKPV 514
           L+S L+LN+LSL+    + DALS +L+ ++ R  A   RQ E V+ +  D ++    +  
Sbjct: 468 LVSQLTLNHLSLVEGPQALDALSEILQLHNLRDEASAHRQIEGVSGLSCDRVIAHVGEDA 527

Query: 515 DKILRGLPVRGLQSTLYVDQAGF-GSEGDLFLFGTVLSHFFALYASINSFHELVVVNISN 573
            +  R     GL+  L +D   F GS     LF  VL+ FF+LYA+ N F   V+V  S+
Sbjct: 528 WRGWR----NGLEVRLQLDPQHFVGSSA--VLFSGVLAQFFSLYATANRFVRTVLVQ-SD 580

Query: 574 QEKYSWGTQSGMQPLI 589
           +E  +W  Q+G +PL+
Sbjct: 581 KEVKTWQPQAG-KPLV 595