Pairwise Alignments

Query, 589 a.a., type VI secretion system baseplate subunit TssF from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., Protein ImpG/VasA from Pseudomonas fluorescens FW300-N2E2

 Score =  420 bits (1079), Expect = e-121
 Identities = 237/608 (38%), Positives = 344/608 (56%), Gaps = 32/608 (5%)

Query: 1   MTQDKYFREELAFLKEQGKEFTEIHPQLSRFLHGRTTDPDVERLLEGFAFLTARLREKVE 60
           M+ + Y++ EL  L++ G+ F E +P L+ FL     DPDVERLLEGFAFLT RLR+K++
Sbjct: 1   MSFNHYYQSELTALRQLGRHFAERNPALAPFLGQAGRDPDVERLLEGFAFLTGRLRQKLD 60

Query: 61  DEFPELTHSIINMLWPNYLRPIPSMSVVAFEPDKSVSEKQVIPRNTQLDSKPVFGTACHF 120
           D+ PEL+HS++ +LWPNY+RP+P+ S++ F+P +       + R+T ++SKPV    C F
Sbjct: 61  DQLPELSHSLMQLLWPNYMRPLPAFSILQFDPLQRSGPALRVERDTPVESKPVQQVRCRF 120

Query: 121 NTCRDVALYPMQCQGVHAEHTREATTIQISLRMLGDMTVGDAKLDTVRFYLGGDKYSSQT 180
            TC    +  +    +      + + + + L M  D  +G+ +L  +R +L G++Y SQ 
Sbjct: 121 LTCYSTEVLALDLTRLSYSVKGDGSLLSLRLEMCCDGHLGELQLSQLRLHLTGERYISQM 180

Query: 181 LYLWLHHYLQKMTI-------------EVQGVEFALPADAFSTVGFSSDQALLPYPKNVY 227
           LYL L   L+ + +             +   + F +PAD    VGF+ ++AL+PYP N +
Sbjct: 181 LYLSLLRNLEGIELIPLDGSGDALRATDGSPMMFRMPADRVQPVGFAEEEALIPYPLNTF 240

Query: 228 DGYRILQEYLSFPEAFHFFDVKGF--AKALPKAVSGDFT---LRIHFSKTLPADTRVRQD 282
            GYR LQEY +F + F F DV G     A P+          LR    K+     R   D
Sbjct: 241 RGYRYLQEYFAFQDKFLFVDVNGLDVINAAPRGSVEQMRGLELRFDIGKSGIQRMRPTLD 300

Query: 283 NFQLYCTPVINLFEHDADPIDLTGRRSEYRIVPSSRYPAHYEIFSVDQVVGWQDTQSEGK 342
           N +L+CTP++NLF+HDA PI L  ++ EY ++P+     H  +FSV+ V GW        
Sbjct: 301 NIKLHCTPIVNLFKHDAQPIRLDSKQDEYLLLPADYAQEHCGVFSVESVTGWNPGGLG-- 358

Query: 343 RIRGEKRIYSSFESFQHEVERVRHRQALYYRTRVKESIRGDGFDSFISF-VRGDETLSMG 401
                 + Y  FESF+H+          YY  R + S+R  G D+ + F VR        
Sbjct: 359 -----YQAYVPFESFEHDSSFDVPHSRPYYSVRQRPSLRHGGLDTCLGFGVRHTHP---- 409

Query: 402 VDEAVSIKLTCTNRLLPLELGVGDICVATDSSPPFATFKNITVPSQSLRPVLDGSLLWTL 461
             E +SI+L CTN+ LP +L  GDI    + SP   +F+NI   + S  P L+   LW L
Sbjct: 410 -HETLSIELMCTNQNLPRQLKSGDIDQPGEKSPESLSFRNIGPVTSSFAPPLNRDFLWKL 468

Query: 462 ISNLSLNYLSLLSKDALSCVLRAYDFRALVDRQAERVARMRLDGIVKIESKPVDKILRGL 521
           ISN+SLNYLSL   +AL  +L  YDF    D Q E+V++  LDG+  I  + VD++ RGL
Sbjct: 469 ISNMSLNYLSLADVNALKVILETYDFPRYYDEQTEKVSKRLLDGLKSIRHQHVDRLHRGL 528

Query: 522 PVRGLQSTLYVDQAGFGSEGDLFLFGTVLSHFFALYASINSFHELVVVNISNQEKYSWGT 581
           PVRGL++ L +D  G+  EGDLF+F +VL+ FFALYAS+NS+HEL  VN +  E Y W  
Sbjct: 529 PVRGLRTELTIDPQGYIGEGDLFVFASVLNEFFALYASLNSYHEL-RVNSTQGEVYQWTP 587

Query: 582 QSGMQPLI 589
           + G QPL+
Sbjct: 588 RMGQQPLL 595