Pairwise Alignments

Query, 589 a.a., type VI secretion system baseplate subunit TssF from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., protein of unknown function DUF879 from Pseudomonas syringae pv. syringae B728a

 Score =  321 bits (822), Expect = 6e-92
 Identities = 213/620 (34%), Positives = 334/620 (53%), Gaps = 53/620 (8%)

Query: 6   YFREELAFLKEQGKEFTEIHPQL-SRFL--HGRTTDPDVERLLEGFAFLTARLREKVEDE 62
           Y+ +EL+ L+  G+EF   +P++ SR L       DP  ERL+E F+FL+AR+ +K++DE
Sbjct: 8   YYEKELSHLRFLGQEFAAQYPKIASRLLIEGDNCEDPHTERLIEAFSFLSARVHKKLDDE 67

Query: 63  FPELTHSIINMLWPNYLRPIPSMSVVAFEPDK--SVSEKQVIPRNTQLDSKPVFGTACHF 120
           FPE+  S + +L+P+YLRP PSMS+V F   K   V+E   + R+T+L + PV G  C F
Sbjct: 68  FPEIVESFLEVLYPHYLRPTPSMSIVEFNMGKQEKVTESYRVARHTELHANPVDGIVCKF 127

Query: 121 NTCRDVALYPMQCQGV-HAEHTREA---------TTIQISLRMLGDMTVGDAKLDTVRFY 170
            TC  V L+P+  Q     E  R A           ++I L    D+  G  ++D++RF+
Sbjct: 128 RTCYPVELWPIAVQSASFIEMERSAFNGHSADLIARLRIGLTATSDVLFGKMEMDSLRFF 187

Query: 171 LGGDKYSSQTLYLWLHHYLQKMTI----EVQGVEFALPADAFSTVGFSSDQALLPYPKNV 226
           L G+      LY  L + L K T+    E +  E  LPA A  +VG+  D+ L+ Y +  
Sbjct: 188 LDGESTLMHQLYELLFNNLAKATLSFEDEGRTREVVLPAGALKSVGYGLDEGLVDYSERS 247

Query: 227 YDGYRILQEYLSFPEAFHFFDVKGFAKALPKAVSGDFTLRIHFS------KTLPADTRVR 280
           + GYR+L EY +FP+ F FFD+ GFA+ L     G   +  +FS      +       V 
Sbjct: 248 FLGYRLLHEYFTFPDKFMFFDLSGFARILAGKEIGKVEINFYFSDYDLTDRLARLTQNVS 307

Query: 281 QDNFQLYCTPVINLFEHDADPIDLTGRRSEYRIVPSSRYPAHYEIFSVDQVVGWQDTQSE 340
           ++NF+L CTP+INLF   A+PI LT  + EY + P  R  +  E+ S+D+V         
Sbjct: 308 RNNFKLNCTPIINLFRQQAEPIKLTHVQHEYAVTPDVRLQSSAEVVSIDRV-------RR 360

Query: 341 GKRIRGEKRIYSSFESFQHEVERVRHRQALYYRTRVKESIRGDGFDSFISFVRGDETLSM 400
            K+I G  ++ +    F+   ++   +     R R  +S + DG + FI  V  D  L  
Sbjct: 361 VKKINGNDQVGTCHPFFEPRGDQGPGQSFWIARRRPTQSRQSDGSNMFIRVVDRDLELID 420

Query: 401 GVDEAVSIKLTCTNRLLPLELGV----GDICVATDSSPPFATFKNITVPSQSLRPVLDGS 456
             ++ +SI+LTC+NR LPL L      GD  + ++S       + +  P+ ++R  L   
Sbjct: 421 SNNDTLSIRLTCSNRDLPLMLPFGGERGDFNIPSNS--VIKDIRCLRKPTATVRVPLGNG 478

Query: 457 LLWTLISNLSLNYLSLLSK--DALSCVLRAYDFRALVDRQAERVARMRLDGIVKIESKPV 514
           ++W LIS+LSLN++SL+SK  + L  +L  Y++R +         R +++GIV + S+PV
Sbjct: 479 VIWRLISHLSLNHMSLVSKGREVLLELLSLYNYRNV------SAIRKQINGIVSVSSEPV 532

Query: 515 DKILRGLP----VRGLQSTLYVDQAGFGSEGDLFLFGTVLSHFFALYASINSFHELVVVN 570
              + G P    VRG+  TL  D++ +   G +FLFG VL HFF  Y S+NSF +L +  
Sbjct: 533 VARI-GHPRPNFVRGVGITLKFDESQYTGSG-VFLFGMVLDHFFGQYCSMNSFTQLTLRT 590

Query: 571 ISNQEK-YSWGTQSGMQPLI 589
           +  +++   W  ++G QPL+
Sbjct: 591 LQREKRVVQWPPRTGDQPLV 610