Pairwise Alignments

Query, 589 a.a., type VI secretion system baseplate subunit TssF from Vibrio cholerae E7946 ATCC 55056

Subject, 590 a.a., type VI secretion system, VCA0110 from Marinobacter adhaerens HP15

 Score =  733 bits (1893), Expect = 0.0
 Identities = 348/594 (58%), Positives = 457/594 (76%), Gaps = 9/594 (1%)

Query: 1   MTQDKYFREELAFLKEQGKEFTEIHPQLSRFLHGRTTDPDVERLLEGFAFLTARLREKVE 60
           M  ++++R+EL+FL+ QG+EF + HPQL+RFL  ++TDPDVERLLEGFAFLT +LREKVE
Sbjct: 1   MRLNRFYRDELSFLRLQGREFADAHPQLTRFLSEQSTDPDVERLLEGFAFLTGKLREKVE 60

Query: 61  DEFPELTHSIINMLWPNYLRPIPSMSVVAFEPD-KSVSEKQVIPRNTQLDSKPVFG---- 115
           DEFPE+THS++NMLWPNYLRP+PS +++ F+P   ++SE+Q + R+T++ S+P+      
Sbjct: 61  DEFPEITHSLLNMLWPNYLRPVPSCTIMRFDPQLHAISERQRVERHTEIKSRPLGDANRQ 120

Query: 116 TACHFNTCRDVALYPMQCQGVHAEHTREATTIQISLRMLGDMTVGDAKLDTVRFYLGGDK 175
           T C F TCR V ++P+     HAEH+RE +++ + L +  D  +    +D++RFYLGG+ 
Sbjct: 121 TQCRFRTCRAVDVFPVSVAAAHAEHSREVSSVTVDLALHTDQPLSSLGMDSLRFYLGGES 180

Query: 176 YSSQTLYLWLHHYLQKMTIEVQGVEFALPADAFSTVGFSSDQALLPYPKNVYDGYRILQE 235
           + ++TL+LWL+HYL+++ + V    + LPA     VGF +++ALLPYPKN Y GYRILQE
Sbjct: 181 HVAETLFLWLNHYLKRIDLVVGDAVYRLPASLLRPVGFGNEEALLPYPKNAYPGYRILQE 240

Query: 236 YLSFPEAFHFFDVKGFAKALPKAVSGDFTLRIHFSKTLPADTRVRQDNFQLYCTPVINLF 295
           YLSFPEAF F D+ G  + LP   + + +LR HFS+ LP D +VR+DNFQLYCTP +NLF
Sbjct: 241 YLSFPEAFRFVDILGLGRRLPALQADEISLRFHFSRILPPDAKVREDNFQLYCTPAVNLF 300

Query: 296 EHDADPIDLTGRRSEYRIVPSSRYPAHYEIFSVDQVVGWQDTQSEGKRIRGEKRIYSSFE 355
            H+ +P+DL GR++EYRI PSSR P HYE+FS++QV GW     EG+  RGE RIY+ FE
Sbjct: 301 THEGEPVDLNGRQTEYRISPSSRSPDHYEVFSIEQVEGWL----EGRSGRGEPRIYTPFE 356

Query: 356 SFQHEVERVRHRQALYYRTRVKESIRGDGFDSFISFVRGDETLSMGVDEAVSIKLTCTNR 415
           SFQHEVER R R ALYYR R ++S+RGDGFD ++SFVRGDE+  +   EAVS+ LTCTNR
Sbjct: 357 SFQHEVERDRGRTALYYRVRARDSVRGDGFDHYMSFVRGDESECLSRQEAVSLTLTCTNR 416

Query: 416 LLPLELGVGDICVATDSSPPFATFKNITVPSQSLRPVLDGSLLWTLISNLSLNYLSLLSK 475
            LP +L VG+IC+AT+S+P FA F NIT P+ +LRP LDGSLLWTLISNLSLNYLS+L  
Sbjct: 417 HLPSQLAVGEICMATESTPAFAAFSNITRPTATLRPTLDGSLLWTLISNLSLNYLSMLDV 476

Query: 476 DALSCVLRAYDFRALVDRQAERVARMRLDGIVKIESKPVDKILRGLPVRGLQSTLYVDQA 535
           DAL  VLR YDFRALVDRQAERV++ RL GI  IE+ PVD++++GLPVRG++S L ++Q 
Sbjct: 477 DALRTVLRVYDFRALVDRQAERVSQKRLAGITCIETAPVDRMVKGLPVRGIRSVLKLEQQ 536

Query: 536 GFGSEGDLFLFGTVLSHFFALYASINSFHELVVVNISNQEKYSWGTQSGMQPLI 589
            F SEGDL+LFGTVLS FFALYASIN+FH+L VVN  NQE+Y+W  Q G QPL+
Sbjct: 537 AFASEGDLYLFGTVLSQFFALYASINAFHQLEVVNTDNQERYTWTLQQGQQPLM 590