Pairwise Alignments

Query, 589 a.a., type VI secretion system baseplate subunit TssF from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., type VI secretion protein from Cupriavidus basilensis FW507-4G11

 Score =  229 bits (583), Expect = 3e-64
 Identities = 180/623 (28%), Positives = 289/623 (46%), Gaps = 53/623 (8%)

Query: 6   YFREELAFLKEQGKEFTEIHPQLSRFL--HG-RTTDPDVERLLEGFAFLTARLREKVEDE 62
           Y+  EL +++E   EF   HP+++R L  HG    DP VERL+E F FL+AR + K++ E
Sbjct: 8   YYNRELVYMRELAGEFANQHPKVARRLGMHGTEVADPYVERLIEAFCFLSARTQIKLDAE 67

Query: 63  FPELTHSIINMLWPNYLRPIPSMSVVAFEPDK---SVSEKQVIPRNTQLDSKPVFG--TA 117
           FP  T  ++ +++PNY+ P PS++V  F P +     +    +PR  Q+D+ P  G  TA
Sbjct: 68  FPRFTQRLLEVVYPNYVAPTPSIAVAQFRPSRVAGDFARGVEVPRGAQVDAAPAPGEKTA 127

Query: 118 CHFNTCRDVALYPMQ-----CQGVHAE----------HTREATTIQISLRMLGDMTVGDA 162
           C F T + + L+P++       G+  +          H      +++ LR   D T    
Sbjct: 128 CQFRTTQPLTLWPLEIAEARLTGIPPDIRGLERYVPAHLTVQGALRLRLRCTHDATFDQL 187

Query: 163 K-LDTVRFYLGGDKYSSQTLYLWLHHYLQKMTIEVQGV----EFALPADAFSTVGFSSDQ 217
             LD +  YL GD   +  L+  LH       I   G       A+  DA S VG    +
Sbjct: 188 PGLDQLPVYLCGDDQIASHLFELLHSASVATLIGQPGAMSERPCAVTEDAVSYVGMGPGE 247

Query: 218 ALLPYPKNVYDGYRILQEYLSFPEAFHFFDVKGFAKALPKAVSGDFTLRIHFSKTLPAD- 276
             LP P N + G+ +L EY + P+ F+FF +   A+   + + G     +    T P + 
Sbjct: 248 GALPLPWNNFFGHNLLHEYFACPQRFYFFGLNKLAQGFGQ-IRGKEAEIVVLLSTPPGNL 306

Query: 277 -TRVRQDNFQLYCTPVINLFEHDADPIDLTGRRSEYRIVPSSRYPAHYEIFSVDQVVGWQ 335
            ++V +D F L+CTPV+NLF    D I++T  R+++ +V   ++P  YEI++V Q+ G +
Sbjct: 307 ISQVDRDQFALFCTPVVNLFPKRTDRIEITPGRTDFHLVADRQHPLDYEIYAVKQLSGQK 366

Query: 336 DTQSEG-------KRIRGEKRIYSSFESFQHEVERVRHRQALYYRTRVKESIRGDGFDSF 388
              S           +  ++  +  + S + E  R+   QA  Y TR        G + F
Sbjct: 367 SEHSASIAFQPLFATLNSDEGNHGRYFSLRRE-RRLISEQARKYGTRTAYV----GTELF 421

Query: 389 ISFVRGDETLSMGVDEAVSIKLTCTNRLLPLEL---GVGDICVATDSSPPFATFKNITVP 445
           +S V   E         +S++   TNR LP  +   G+ D+  A  +S P      I  P
Sbjct: 422 VSLVDQHEAPYPDTLRYLSVESLVTNRDLPNLVPRNGLHDLTPA--ASIPVDGIGLIRAP 479

Query: 446 SQSLRPVLDGSLLWTLISNLSLNYLSLLSKDALSCVLRAYDFRALVDRQAERVARMRLDG 505
           S    P  DG + W LI  L  NYLSL   +  S      D   L     +   + ++  
Sbjct: 480 SAPRPPYADGEMAWRLIRLLGFNYLSLTDLEHRSGGQGLRDMLRLFVASDDLAHQAQIQS 539

Query: 506 IVKIESKPVDKILRG----LPVRGLQSTLYVDQAGFGSEGDLFLFGTVLSHFFALYASIN 561
           ++  + +PV + L G    +  RG++  L VD+ GF      +LFG VL HF A + S+N
Sbjct: 540 LIGSKVEPVMRRLPGNGPLIYGRGIRCQLTVDEGGFSGISP-YLFGVVLEHFLARHVSVN 598

Query: 562 SFHELVVVNISNQEKYSWGTQSG 584
            F +  + ++     + W  + G
Sbjct: 599 VFTQTELHSMQRGLVHRWPVRMG 621