Pairwise Alignments

Query, 589 a.a., type VI secretion system baseplate subunit TssF from Vibrio cholerae E7946 ATCC 55056

Subject, 612 a.a., type VI secretion system protein ImpG from Paraburkholderia bryophila 376MFSha3.1

 Score =  237 bits (604), Expect = 1e-66
 Identities = 185/605 (30%), Positives = 297/605 (49%), Gaps = 59/605 (9%)

Query: 6   YFREELAFLKEQGKEFTEIHPQLSRFLH---GRTTDPDVERLLEGFAFLTARLREKVEDE 62
           Y+  EL+FL+   ++F E +P+++  L        DP VER++E FA L AR+ +K++D+
Sbjct: 7   YYERELSFLRRYSRDFAERYPKIAARLAMSGEHCEDPHVERMIESFALLGARINKKLDDD 66

Query: 63  FPELTHSIINMLWPNYLRPIPSMSVVAFEPDKSVS---EKQVIPRNTQLDSKPVFGTACH 119
           +PE T +++ +L+P+YLRP PS S+       ++S   E   I R T+L S+P+ G  C 
Sbjct: 67  YPEFTEALLEVLYPHYLRPFPSCSIAQLGTSAALSHLTEPVTIERGTELKSRPIRGVQCR 126

Query: 120 FNTCRDVALYPMQCQGVHAEHTREA-----------TTIQISLRM---LGDMTVGDAKLD 165
           F T  DV L P++     A++T  A            T  +S+        + +   K+D
Sbjct: 127 FRTAYDVTLAPVRIS--EAKYTSVAMAPSATVLPGNATAIVSITFESTAAQLDLSALKVD 184

Query: 166 TVRFYLGGDKYSSQTL--YLWLHHYLQKMTIEVQGVEFALPADAFSTVGFSSDQALLPYP 223
           T+R +L G++     L   L+++     +  + +GV   L A      GF    AL+ YP
Sbjct: 185 TLRAHLHGEQSFIAALADCLFVNAMATYVEADRRGVWTQLRASPLVQAGFDEQDALIDYP 244

Query: 224 KNVYDGYRILQEYLSFPEAFHFFDVKGFAKALPKAVSGDFTLRIHF-SKTLPADTRVRQ- 281
              +  YR+L EY +FPE F+F D      A+ +A      L +H   K + +D+ V + 
Sbjct: 245 AKSHPAYRLLTEYFAFPEKFNFADFD--LTAMTRATGRCQRLTLHIVLKEVRSDSHVARL 302

Query: 282 ------DNFQLYCTPVINLFEHDADPIDLTGRRSEYRIVPSSRYPAHYEIFSVDQVVGWQ 335
                  +F+L+CTPV+NLFE   +PI +T +   Y ++  +R    YE++S+D  V + 
Sbjct: 303 LDALSAHHFRLFCTPVVNLFEQHGEPIRVTHQAVSYPVIAEARRAFAYEVYSIDS-VKFV 361

Query: 336 DTQSEGKRIRGEKRIYSSFESFQHEVERVRHRQALYYRTRVKESIRGDGFDSFISFVRGD 395
             Q+  + +   +  YS      H  E  R     + R     + +  G+++ IS V  D
Sbjct: 362 RQQAHQESVTEFRPFYS-----LHHGEAARAGHYWFARRNDWVAQKSPGYETEISIVDID 416

Query: 396 ETLSMGVDEAVSIKLTCTNRLLPLELGV----GDICVATDSSPPFATFKNITVPSQSLRP 451
              +    + +S+ LTCTNR LP  L V    GD+ +   S     T   +  P+ S+R 
Sbjct: 417 FEPAAPQTDTLSLDLTCTNRDLPAGLAVGLEGGDLFLEGGSLTGSITM--LRRPTPSVRF 474

Query: 452 VLDGSLLWTLISNLSLNYLSLLSK--DALSCVLRAYDFRALVDRQAERVARMRLDGIVKI 509
               +  W LIS+L+LN++SL +    AL  +L  YD R         V+   +DG+V I
Sbjct: 475 ERGRAAHWRLISHLALNHVSLANSGLSALKEMLVLYDLRRTA------VSARHIDGLVGI 528

Query: 510 ESKPVDKILRGLP----VRGLQSTLYVDQAGFGSEGDLFLFGTVLSHFFALYASINSFHE 565
           E     + L G P    VRG++  L +D+  F     L  F  V+  FF LY  +NSF +
Sbjct: 529 EQCAAVQWLPGKPFATFVRGIEIRLTIDEEHFVGT-SLASFVRVIDTFFGLYVHLNSFVQ 587

Query: 566 LVVVN 570
           LVVV+
Sbjct: 588 LVVVS 592