Pairwise Alignments

Query, 492 a.a., type VI secretion system contractile sheath large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., Uncharacterized protein ImpC from Pseudomonas fluorescens FW300-N2E2

 Score =  731 bits (1887), Expect = 0.0
 Identities = 341/491 (69%), Positives = 420/491 (85%)

Query: 2   MSTTEKVLERPQLAQGSLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVN 61
           MST     + P  A  S+L+ I+AQTR+ P ++ YDIA++GV+AFIE L+  Q+S EPV 
Sbjct: 1   MSTHALQQQSPDNADYSILENIIAQTRLTPDDDAYDIARRGVSAFIEELLKPQNSGEPVK 60

Query: 62  KSLVDQMLVELDKKISAQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTK 121
           K++VD+M+ E+D K+S QMDEILH+ QFQA+ESAWRGL+L VDRT+FREN K+E+L+V+K
Sbjct: 61  KAMVDRMIAEIDAKLSRQMDEILHHPQFQALESAWRGLQLLVDRTNFRENIKIEMLNVSK 120

Query: 122 DELLEDFEFAPETAQSGLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGAL 181
           D+LL+DFE +PE  QSGLYKH+Y+A YGQFGG+PV A+I NY  +PS+PD+KL+QY+ ++
Sbjct: 121 DDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVAAVIANYFMSPSSPDVKLMQYVSSV 180

Query: 182 GAMAHAPFISSVGPEFFGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAP 241
             M+HAPFI++ GP FFG++SF  LP++KDLK  FE P++ KW+S R+SEDARY GLT P
Sbjct: 181 ACMSHAPFIAAAGPTFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYFGLTVP 240

Query: 242 RFLLRVPYDPIENPVKSFNYAENVSASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGP 301
           RFLLR PYDP ENPVKSF Y E V+ SHEHYLWGNTA+AF TRLTDSFAK+RWCPNI+GP
Sbjct: 241 RFLLRTPYDPQENPVKSFVYKETVANSHEHYLWGNTAYAFGTRLTDSFAKFRWCPNIVGP 300

Query: 302 QSGGAVEDLPVHVFESMGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSA 361
           QSGGAVEDLP+H FESMG +++KIPTEVL++DR+E+ELAEEGFI+LTMRKGSDNAAFFSA
Sbjct: 301 QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA 360

Query: 362 NSIQKPKVFPNTKEGKEAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLER 421
           +S+QKPK F N  E K AE NYKLGTQLPYMMI+NRLAHY+KVLQREQ+G+WKER DLER
Sbjct: 361 SSVQKPKFFGNGAEDKHAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLER 420

Query: 422 ELNSWIKQYVADQENPPADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANF 481
           ELN+WI+QYVADQENP A+VR RRPLRAA+I V DVEG PGWY+V L+VRPHFKYMGA+F
Sbjct: 421 ELNNWIRQYVADQENPSAEVRGRRPLRAAKIIVSDVEGEPGWYRVGLNVRPHFKYMGADF 480

Query: 482 ELSLVGRLDQA 492
            LSLVG+LD+A
Sbjct: 481 TLSLVGKLDKA 491