Pairwise Alignments

Query, 492 a.a., type VI secretion system contractile sheath large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., Protein of unknown function DUF877 from Pseudomonas syringae pv. syringae B728a

 Score =  375 bits (964), Expect = e-108
 Identities = 194/479 (40%), Positives = 289/479 (60%), Gaps = 6/479 (1%)

Query: 16  QGSLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVNKSLVDQMLVELDKK 75
           Q SLLD I++++R+A SE      +  +   +  ++  + +      +++D  + E+D  
Sbjct: 23  QSSLLDSIISESRVARSETERTRTRDLIGELVAQVLEGEMTPSKDLIAVLDARIAEIDSM 82

Query: 76  ISAQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDELLEDFEFAPETA 135
           +S QM+EI+H  +FQ +E++WRGLK  VD+T+     K+ +L+ +K +L+ D + + E  
Sbjct: 83  LSEQMNEIMHAREFQQLEASWRGLKYQVDQTETSTTLKIHLLNASKKDLVRDLKASSEFD 142

Query: 136 QSGLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALGAMAHAPFISSVGP 195
           QS L+K +Y   YG FGG P G ++G+Y F  S  DM LL+ +  + A AHAPFIS+   
Sbjct: 143 QSALFKKIYEEEYGTFGGAPFGMLLGDYEFNRSPEDMYLLEEISHVAAAAHAPFISAASA 202

Query: 196 EFFGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPRFLLRVPYDPIENP 255
           E FG DSF ++   +DL   F++ +Y KW+S R SED+RY+GLT P  L R+PY P   P
Sbjct: 203 ELFGWDSFTDMAGPRDLAKIFDTVEYAKWKSFRASEDSRYVGLTLPHVLGRLPYGPDTTP 262

Query: 256 VKSFNYAENVSA-SHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGPQSGGAVEDLPVHV 314
           V+ FN+ E+V    H  YLW N A+A  TR+TD+F++Y WC  I G + GG VE LP H 
Sbjct: 263 VEEFNFVESVDGRDHNKYLWMNAAYALGTRVTDAFSRYGWCVAIRGVEGGGLVEGLPTHT 322

Query: 315 FES-MGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQKPKVFPNT 373
           F++  G +  K PTE+ ITDR+E EL++ GFI L   KG+D AAFF   S QK K + NT
Sbjct: 323 FKTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCKGTDYAAFFGTQSTQKQKQY-NT 381

Query: 374 KEGKEAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNSWIKQYVAD 433
                A  N +L  QL Y+   +R+AHY+K + R++IG++  R+D+E  LN W+  YV  
Sbjct: 382 ---DIANANARLSAQLQYIFATSRIAHYMKAIMRDKIGSFASRKDVELFLNKWLSSYVLL 438

Query: 434 QENPPADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANFELSLVGRLDQA 492
            +    + +++ PLR AR EV +V G PG Y+    +RPH++       L LV  L Q+
Sbjct: 439 DDTASQEAKAKFPLREARAEVFEVPGKPGVYKAVTYLRPHYQLDELTASLRLVAELPQS 497