Pairwise Alignments

Query, 168 a.a., type VI secretion system contractile sheath small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 186 a.a., Uncharacterized protein ImpB from Pseudomonas fluorescens FW300-N2E2

 Score = 64.3 bits (155), Expect = 1e-15
 Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 3/144 (2%)

Query: 12  RINIKYIPATGDAQAEVELPLKTLVVGDFKGHA-EQTP-LEERATVTVDKNNFEAVMRES 69
           R+ I Y    G+A  + ELPL   ++ D  G   +  P L ER    +D++NF  V+   
Sbjct: 16  RVQITYDVEIGNAIEKKELPLVVGILADLSGKPLDPLPKLNERRFTEIDRDNFNEVLASI 75

Query: 70  ELKITATVKNKLTDDENAELPVELNFKSLADFAPDAVASQVPELKKLIELREALVALKGP 129
             + T  V N L+ D++ +L +ELNF+ + DF P  V  QV  L++L E R+ L  L   
Sbjct: 76  SPRATLQVNNTLSGDDS-KLNIELNFRHIDDFDPVKVVEQVTPLRRLFEARQRLRDLLTK 134

Query: 130 LGNIPAFRERLQSLLNSEESREKL 153
           L       + L+ ++ + E  +++
Sbjct: 135 LDGNDDLDKLLRDVIANTEGLQEI 158