Pairwise Alignments

Query, 168 a.a., type VI secretion system contractile sheath small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., Uncharacterized protein ImpB from Pseudomonas fluorescens FW300-N2E2

 Score =  167 bits (422), Expect = 1e-46
 Identities = 82/162 (50%), Positives = 117/162 (72%), Gaps = 1/162 (0%)

Query: 1   MSKEGSVAPKERINIKYIPATGDAQAEVELPLKTLVVGDFKGHAEQTPLEERATVTVDKN 60
           M+KEGS+APKERIN+ + PATG AQ E+ELPLK L +GD+    ++  +E+R  + +DK 
Sbjct: 1   MAKEGSIAPKERINVTFKPATGGAQEEIELPLKLLAIGDYTHRRDERKIEDRKPIGIDKM 60

Query: 61  NFEAVMRESELKITATVKNKLTDD-ENAELPVELNFKSLADFAPDAVASQVPELKKLIEL 119
            F+ V+ + EL +T +V N+L ++ E  EL V+L   S+ DF P ++  QVPEL KL+EL
Sbjct: 61  TFDEVLAKQELNLTLSVPNRLQEESETEELAVQLRVNSMKDFNPASLVEQVPELSKLMEL 120

Query: 120 REALVALKGPLGNIPAFRERLQSLLNSEESREKLLAELNLLS 161
           R+ALVALKGPLGN PAFR+ ++ +L +++SR +LL EL L S
Sbjct: 121 RDALVALKGPLGNAPAFRKAIEGVLGNDDSRRRLLDELGLNS 162