Pairwise Alignments

Query, 168 a.a., type VI secretion system contractile sheath small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., Uncharacterized protein ImpB from Pseudomonas fluorescens FW300-N1B4

 Score =  167 bits (424), Expect = 6e-47
 Identities = 82/166 (49%), Positives = 120/166 (72%), Gaps = 1/166 (0%)

Query: 1   MSKEGSVAPKERINIKYIPATGDAQAEVELPLKTLVVGDFKGHAEQTPLEERATVTVDKN 60
           M+KEGSVAPKERIN+ + PATG AQ E+ELPLK L +GD+    ++  +E+R  +++DK 
Sbjct: 1   MAKEGSVAPKERINVTFKPATGGAQEEIELPLKLLAIGDYTHRKDERKIEDRKPISIDKM 60

Query: 61  NFEAVMRESELKITATVKNKLTDD-ENAELPVELNFKSLADFAPDAVASQVPELKKLIEL 119
            F+ V+ + EL +T +V N+L ++ +  EL V+L   S+ DF P ++  QVPELKKL+EL
Sbjct: 61  TFDEVLAKQELSLTLSVPNRLQEESDTEELAVKLRVNSMKDFNPASLVEQVPELKKLMEL 120

Query: 120 REALVALKGPLGNIPAFRERLQSLLNSEESREKLLAELNLLSGQEE 165
           R+ALVALKGPLGN PAFR+ ++ +L  +ESR ++L EL L +  ++
Sbjct: 121 RDALVALKGPLGNAPAFRKAIEGVLADDESRGRVLGELGLNAAAQD 166