Pairwise Alignments

Query, 168 a.a., type VI secretion system contractile sheath small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 168 a.a., type VI secretion protein, VC_A0107 family from Pseudomonas stutzeri RCH2

 Score =  176 bits (445), Expect = 2e-49
 Identities = 87/165 (52%), Positives = 124/165 (75%), Gaps = 1/165 (0%)

Query: 1   MSKEGSVAPKERINIKYIPATGDAQAEVELPLKTLVVGDFKGHAEQTPLEERATVTVDKN 60
           M+KEGSVAPKERIN+ + PATG+AQ EVELPLK +V+GDF   A+   +E+R  + +DKN
Sbjct: 1   MAKEGSVAPKERINVTFKPATGNAQEEVELPLKLMVLGDFTQRADDRKIEDRKPIAIDKN 60

Query: 61  NFEAVMRESELKITATVKNKLTDDE-NAELPVELNFKSLADFAPDAVASQVPELKKLIEL 119
           +F+ V+ + EL +T  V N+L D++ + EL V+L   S+ DF P  +  QVPELKKL+EL
Sbjct: 61  SFDEVLAKQELNLTFGVPNRLQDEQTDDELAVQLRINSMKDFNPANLVEQVPELKKLMEL 120

Query: 120 REALVALKGPLGNIPAFRERLQSLLNSEESREKLLAELNLLSGQE 164
           R+ALVALKGPLGN PAFR+ ++S+L  ++SR+++L EL L + ++
Sbjct: 121 RDALVALKGPLGNAPAFRKAIESVLADDDSRDRVLGELGLAAKEK 165