Pairwise Alignments

Query, 168 a.a., type VI secretion system contractile sheath small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 177 a.a., Uncharacterized conserved protein UCP028301 from Pseudomonas syringae pv. syringae B728a

 Score = 86.3 bits (212), Expect = 3e-22
 Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 3/144 (2%)

Query: 12  RINIKYIPATGDAQAEVELPLKTLVVGDFKGHA-EQTP-LEERATVTVDKNNFEAVMRES 69
           R++I Y    GDAQ + ELP    V+GDF G+  E  P L++R  + +D++NF  V++  
Sbjct: 18  RVHITYDVDIGDAQEKKELPFVVGVLGDFSGNPLEPLPKLKDRKFIFIDRDNFNGVLKGI 77

Query: 70  ELKITATVKNKLTDDENAELPVELNFKSLADFAPDAVASQVPELKKLIELREALVALKGP 129
           + ++   V N L  D   +L VELNF +L DF P  V  QV  L+KL+E+R  L  L+  
Sbjct: 78  KPRLAYRVDNTLAKD-GTQLGVELNFNALEDFEPQNVVRQVEPLRKLLEVRNKLADLRNK 136

Query: 130 LGNIPAFRERLQSLLNSEESREKL 153
           +G      E L  +L + E  + L
Sbjct: 137 MGGNDKLEELLMDVLQNTEKLKTL 160