Pairwise Alignments

Query, 168 a.a., type VI secretion system contractile sheath small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., type VI secretion system contractile sheath small subunit from Pseudomonas sp. BP01

 Score =  178 bits (451), Expect = 5e-50
 Identities = 91/161 (56%), Positives = 124/161 (77%), Gaps = 2/161 (1%)

Query: 1   MSKE-GSVAPKERINIKYIPATGDAQAEVELPLKTLVVGDFKGHAEQTPLEERATVTVDK 59
           MSK  GSVAPKER+NIKY+PAT + QAEVELP K LV+GDF G  +   LE+R  V +DK
Sbjct: 1   MSKNTGSVAPKERVNIKYVPATSNEQAEVELPHKMLVLGDF-GLDDSRALEDRQVVRIDK 59

Query: 60  NNFEAVMRESELKITATVKNKLTDDENAELPVELNFKSLADFAPDAVASQVPELKKLIEL 119
           + F +V+ ++++ +  +V ++L+   +AEL V L F+S+ DF PD +A QVPEL KL+EL
Sbjct: 60  HTFNSVLNDADVSLDVSVPSRLSTAPDAELAVHLQFRSINDFGPDRIARQVPELNKLLEL 119

Query: 120 REALVALKGPLGNIPAFRERLQSLLNSEESREKLLAELNLL 160
           REALVALKGPLGN+PAFR+ LQ LLN+E++R++L  EL+L+
Sbjct: 120 REALVALKGPLGNVPAFRKHLQHLLNNEQARKQLAQELDLV 160