Pairwise Alignments

Query, 94 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Uncharacterized conserved protein from Pseudomonas stutzeri RCH2

 Score = 52.4 bits (124), Expect = 8e-12
 Identities = 31/61 (50%), Positives = 34/61 (55%), Gaps = 3/61 (4%)

Query: 33 GIPAARLGDPLAPHDKPKHPSHGRAIAAGSGTVMIDGKPAARVGDAVDCGGVLQGASSVN 92
          G PAARLGDP A    PK       IA GS  V+ DG PAAR GDA  CGG +  A   N
Sbjct: 3  GKPAARLGDPTAC---PKTGHGTNPIAVGSPDVLFDGLPAARQGDASACGGAMASAVIPN 59

Query: 93 I 93
          +
Sbjct: 60 V 60



 Score = 47.0 bits (110), Expect = 3e-10
 Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 9/80 (11%)

Query: 16 GFPPTPVTAGSATVRYDGIPAARLGDPLAPHDKPKHPSHGRAIAAGSGTVMIDGKPAARV 75
          G    P+  GS  V +DG+PAAR GD  A          G   +A    V+IDGKPAA V
Sbjct: 19 GHGTNPIAVGSPDVLFDGLPAARQGDASA--------CGGAMASAVIPNVLIDGKPAAVV 70

Query: 76 GDAVDCGGVL-QGASSVNIG 94
          G   + G V+  G+ +V IG
Sbjct: 71 GSVGNHGNVVTAGSGTVIIG 90



 Score = 27.3 bits (59), Expect = 3e-04
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 67 IDGKPAARVGDAVDCGGVLQGASSVNIG 94
          + GKPAAR+GD   C     G + + +G
Sbjct: 1  MSGKPAARLGDPTACPKTGHGTNPIAVG 28