Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N2E2

 Score =  102 bits (254), Expect = 2e-26
 Identities = 73/216 (33%), Positives = 107/216 (49%), Gaps = 15/216 (6%)

Query: 342 EDNPLLSNPAQGQDITIVYQDDAIVVVNKPAEFLSVPGVHVHDSVLTRLKAQFTQAEGVF 401
           E  PL     Q  + +I+Y+D A++V+NKPA      G  ++  V+   +     A+ + 
Sbjct: 85  EPVPLAQGLLQRLEASIIYEDKALIVINKPAGIAVHGGSGLNFGVIEAFRQLRPDAKELE 144

Query: 402 ALHRLDMSTSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLC-G 460
            +HRLD  TSGLL+ A  R   + L +Q     V KRY+AL+ G+   +  +++ PL   
Sbjct: 145 LVHRLDRDTSGLLMIAKKRSMLRHLHEQLRGDGVDKRYMALVRGRWETSIKQVRAPLLKS 204

Query: 461 DLDDRPRQKVCWQQGKPALTHWETV-QVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAP 519
           +L    R     ++GK ALT ++ + + +   T V   P TGRTHQ+RVH  H       
Sbjct: 205 NLRSGERMVEVNEEGKEALTVFKVLRRFDDFATLVEAKPVTGRTHQIRVHTLH---AGHC 261

Query: 520 IVGDDLYGLQD----------KRLFLHAEQLSFAHP 545
           I GD  YG  D          KRLFLHA  L+   P
Sbjct: 262 IAGDSKYGDDDFTKEIRDLGGKRLFLHAYMLTVPLP 297