Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N2E2

 Score =  128 bits (321), Expect = 2e-34
 Identities = 84/213 (39%), Positives = 117/213 (54%), Gaps = 14/213 (6%)

Query: 355 DITIVYQDDAIVVVNKPAEFLSVPGV--HVHDSVLTRLKAQ-FTQAEGVFALHRLDMSTS 411
           +I I++QD A++VV+KP   LSVPG      D ++TRL+   + +A  V   HRLD  TS
Sbjct: 5   NIRIIHQDAAVLVVDKPTLLLSVPGRADDNKDCLITRLQENGYPEARIV---HRLDWETS 61

Query: 412 GLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRPRQKVC 471
           G+++ A     +++L +QF  R  +K Y AL  G+     G I LPL  D   +PR  V 
Sbjct: 62  GIILLARDPDTHRELSRQFHDRETEKAYTALCWGQPELDSGSIDLPLRYDPPTKPRHVVD 121

Query: 472 WQQGKPALTHWETVQVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGDDLYGLQD- 530
            + GK ALT W  ++   +  RV L P TGR+HQLRVH    L +  P++GD LY     
Sbjct: 122 HEHGKHALTFWRVLERCGDWCRVELTPITGRSHQLRVHM---LSIGHPLLGDGLYAHPQA 178

Query: 531 ----KRLFLHAEQLSFAHPYTKQPMTFQVDADF 559
                RL LHA  LSF HP + + + F+  A F
Sbjct: 179 LAAWPRLCLHASMLSFTHPQSGERLRFECPAPF 211