Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N2E2

 Score =  100 bits (249), Expect = 8e-26
 Identities = 75/225 (33%), Positives = 113/225 (50%), Gaps = 26/225 (11%)

Query: 351 AQGQDITIVYQDDAIVVVNKPAEFLSVPGV-HVHDSVLTRLKAQFTQAEGV---FALHRL 406
           AQ   + IVY+D+ I+V+NKPA  +  P   H   ++L  L         V     +HRL
Sbjct: 64  AQDIALDIVYEDEDILVINKPAGLVVHPAAGHADGTLLNALLHHVPDIINVPRAGIVHRL 123

Query: 407 DMSTSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRP 466
           D  T+GL+V A T +A  QL  Q  SR+V + Y  ++ G ++   G+I  P+      R 
Sbjct: 124 DKDTTGLMVVAKTIQAQTQLVTQLQSRSVSRIYECIVIGVVT-AGGKINAPIGRHGQQRQ 182

Query: 467 RQKVCWQQGKPALTHWETVQVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGDDLY 526
           R  V  + GK A++H+  ++  ++ T V +   TGRTHQ+RVH AH   +N P+VGD  Y
Sbjct: 183 RMAVM-EGGKQAVSHYRVLERFRSHTHVRVKLETGRTHQIRVHMAH---INFPLVGDPAY 238

Query: 527 GLQDK-----------------RLFLHAEQLSFAHPYTKQPMTFQ 554
           G + +                 R  LHA  L   HP T + M+++
Sbjct: 239 GGRFRIPPAASQTMVESLKNFPRQALHARFLELDHPTTGKRMSWE 283