Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., pseudouridine synthase, RluA family from Pseudomonas stutzeri RCH2

 Score =  134 bits (336), Expect = 4e-36
 Identities = 86/212 (40%), Positives = 119/212 (56%), Gaps = 14/212 (6%)

Query: 356 ITIVYQDDAIVVVNKPAEFLSVPG--VHVHDSVLTRLKAQ-FTQAEGVFALHRLDMSTSG 412
           I IV+QD A++V+NKP   LSVPG      D ++TRL+   + +A  V   HRLD  TSG
Sbjct: 6   IEIVHQDAALLVINKPTLLLSVPGRAEDNRDCLVTRLQENGYPEARIV---HRLDWETSG 62

Query: 413 LLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRPRQKVCW 472
           L+V A     +++L +QF  R  +K Y AL  G+  +  G I LPL  D   +PR  V  
Sbjct: 63  LIVLARDADTHRELSRQFHDRETEKAYTALCWGEPEQDSGSIDLPLRYDPPTKPRHVVDH 122

Query: 473 QQGKPALTHWETVQVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGDDLYGLQD-- 530
           + GK ALT W  ++   + +RV L P TGR+HQLRVH    L +  P++GD LY  +   
Sbjct: 123 ELGKHALTFWRVLERCGDYSRVELTPITGRSHQLRVHM---LSIGHPLLGDRLYAHEQAL 179

Query: 531 ---KRLFLHAEQLSFAHPYTKQPMTFQVDADF 559
              +RL LHA  L+  HP T + + F+  A F
Sbjct: 180 QAHERLCLHASMLTLTHPQTGERLRFECPAPF 211