Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., pseudouridine synthase, RluA family from Pseudomonas stutzeri RCH2

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 76/216 (35%), Positives = 104/216 (48%), Gaps = 15/216 (6%)

Query: 342 EDNPLLSNPAQGQDITIVYQDDAIVVVNKPAEFLSVPGVHVHDSVLTRLKAQFTQAEGVF 401
           E  PL     +  D  IVY+D A++V+NKPA      G  +   V+  L+     A+ + 
Sbjct: 81  EPEPLAQGLLERLDKAIVYEDKALIVLNKPAGIAVHGGSGLSYGVIEALRQLRPDAKELE 140

Query: 402 ALHRLDMSTSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLC-G 460
            +HRLD  TSGLL+ A  R   + L +      V KRY+AL+ G+   ++ ++  PL   
Sbjct: 141 LVHRLDRDTSGLLMVAKKRSMLRHLHQALRGDGVDKRYMALVRGRWETSKKQVNAPLLKN 200

Query: 461 DLDDRPRQKVCWQQGKPALTHWETV-QVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAP 519
            L    R     + GK ALT +  + +  +  T V   P TGRTHQ+RVH A H G +  
Sbjct: 201 TLRSGERMVEVTEDGKEALTLFHVLRRFGEFATLVEAKPVTGRTHQIRVH-ARHAGHS-- 257

Query: 520 IVGDDLYG----------LQDKRLFLHAEQLSFAHP 545
           I GD  YG          L  KRLFLHA  L    P
Sbjct: 258 IAGDSKYGDEEFTREIRELGGKRLFLHAYALRVPLP 293