Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., ribosomal large subunit pseudouridine synthase A from Pseudomonas syringae pv. syringae B728a

 Score =  137 bits (345), Expect = 4e-37
 Identities = 88/213 (41%), Positives = 120/213 (56%), Gaps = 14/213 (6%)

Query: 355 DITIVYQDDAIVVVNKPAEFLSVPGV--HVHDSVLTRLKAQ-FTQAEGVFALHRLDMSTS 411
           +I I++QD A++V++KP   LSVPG      D ++TRL+   + +A  V   HRLD  TS
Sbjct: 5   NIRIIHQDAAVLVIDKPTLLLSVPGRADDNKDCLITRLQENGYPEARIV---HRLDWETS 61

Query: 412 GLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRPRQKVC 471
           G+++ A     +++L +QF  R  +K Y AL  G+ S   G I LPL  D   +PR  V 
Sbjct: 62  GIILLARDADTHRELSRQFHDRETEKAYTALCWGQPSLDSGSIDLPLRYDPPTKPRHVVD 121

Query: 472 WQQGKPALTHWETVQVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGDDLYGLQD- 530
            + GK ALT W+ V+      RV L P TGR+HQLRVH    L +  P++GD LY   + 
Sbjct: 122 HEGGKHALTFWKVVERHDTYCRVELTPITGRSHQLRVHM---LSIGHPLLGDGLYAHPEA 178

Query: 531 ----KRLFLHAEQLSFAHPYTKQPMTFQVDADF 559
                RL LHA  LSF HP T + MTF+  A F
Sbjct: 179 LAAYPRLCLHASMLSFTHPGTGERMTFECAAPF 211