Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., ribosomal large subunit pseudouridine synthase C protein from Sinorhizobium meliloti 1021

 Score = 93.6 bits (231), Expect = 1e-23
 Identities = 80/237 (33%), Positives = 113/237 (47%), Gaps = 28/237 (11%)

Query: 325 QSKCQPILAHMLEGMPLEDNPLLSNPAQGQDITIVYQDDAIVVVNKPAEFLSVPGVHVHD 384
           ++K  PI    L   P  D  LLS         ++++D  ++V+NKPA      G  V+ 
Sbjct: 73  EAKSGPIGGRDLRQSP--DGELLSR-------MVLHEDAKVIVLNKPAGLAVQGGSGVNR 123

Query: 385 SVLTRLKAQFTQ-AEGVFALHRLDMSTSGLLVFALTRRANKQLQKQFISRAVQKRYVALI 443
            +   L+A  +Q  E    +HRLD  TSG+LV A TR A +QL   F  R  +K Y AL+
Sbjct: 124 HIDKMLEAWTSQKGEKPRLVHRLDRDTSGVLVVARTRGAAQQLTAAFRERDTKKTYWALV 183

Query: 444 EGKLSETQGEIQLPLCGDL---DDRPRQKVCWQQGKP-ALTHWETV-QVEQNRTRVYLYP 498
            G   + + +I   L  +     DR R     + G   A++++  V Q  QN   + + P
Sbjct: 184 RGVPRKREDKISTWLVKEPTPDGDRVRIAKHGEDGADHAISYYRIVEQAGQNLAWLEMEP 243

Query: 499 HTGRTHQLRVHCAHHLGLNAPIVGDDLY----------GLQDKRLFLHAEQLSFAHP 545
           +TGRTHQLRVH AH   +  PI+GD  Y          G    RL LHA  +   HP
Sbjct: 244 YTGRTHQLRVHAAH---IGHPIIGDPKYFEADVNWTFPGGMQNRLHLHARHIDIPHP 297