Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., pseudouridylate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  168 bits (425), Expect = 2e-46
 Identities = 94/217 (43%), Positives = 132/217 (60%), Gaps = 19/217 (8%)

Query: 356 ITIVYQDDAIVVVNKPAEFLSVPGV--HVHDSVLTRLKAQFTQAEGVFALHRLDMSTSGL 413
           + I Y D  ++++NKP+  LS PG+  H HDS +TRL   + +A     +HRLD +TSG+
Sbjct: 14  LDIRYIDRDLIIINKPSGLLSNPGMAAHTHDSAITRLCRLYPEA---ILVHRLDCATSGI 70

Query: 414 LVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRPRQKVCWQ 473
           +VFA +++A   L+ QF +R  +KRY+A + G + + +G I LPL  D  + P QKV   
Sbjct: 71  MVFARSKKAESNLKTQFQNRDTEKRYLAQVAGIIEQDEGTIDLPLGKDRSNPPWQKVDMA 130

Query: 474 QGKPALTHWETVQVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGDDLYGLQDK-- 531
           +G+PA+TH+  +   +N T V L P TGRTHQLRVH    L L  PI+GDD YG   +  
Sbjct: 131 EGRPAVTHYRVLARRENSTLVALEPETGRTHQLRVHM---LSLGHPILGDDFYGRTQEFG 187

Query: 532 ---------RLFLHAEQLSFAHPYTKQPMTFQVDADF 559
                    RL LHAE+LSF HP++ +PMTF   A F
Sbjct: 188 QGTVEEASPRLCLHAERLSFKHPWSNKPMTFVSRAPF 224