Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., RluA family pseudouridine synthase from Rahnella sp. WP5

 Score =  124 bits (312), Expect = 3e-33
 Identities = 87/217 (40%), Positives = 110/217 (50%), Gaps = 25/217 (11%)

Query: 347 LSNPAQGQDITIVYQDDAIVVVNKPAEFLSVPGVHVH--DSVLTRLKAQFTQAEGVFALH 404
           ++ P  GQ I  +YQD+ + ++NKP   LS+ G +    DSV  RL   F    G   +H
Sbjct: 9   IAPPCHGQ-IETLYQDEHLALINKPTGLLSLSGKNPQNLDSVHHRLVKIFP---GCTLVH 64

Query: 405 RLDMSTSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDD 464
           RLD  TSGL+V A  +  N  L  QF  R V K Y AL+ G L   +G    P+  D   
Sbjct: 65  RLDFGTSGLMVIARNKAINAALCHQFSQRTVTKVYSALLCGHLQHNEGVTDAPIAKDPAL 124

Query: 465 RPRQKVCWQQGKPALTHWETVQ---VEQNR------TRVYLYPHTGRTHQLRVHCAHHLG 515
            P   +C   GKPA + +  V+    EQ        TRV L P TGRTHQLR+HC +   
Sbjct: 125 FPLMSICAVHGKPARSGYRVVERFYREQENGELLPLTRVLLTPQTGRTHQLRIHCQY--- 181

Query: 516 LNAPIVGDDLYG-------LQDKRLFLHAEQLSFAHP 545
           L  PI+G DLYG        Q  RL LHA +L F HP
Sbjct: 182 LGHPILGCDLYGGRLLPGTEQTPRLMLHASELHFVHP 218