Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., RluA family pseudouridine synthase from Parabacteroides merdae CL09T00C40

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 17/209 (8%)

Query: 356 ITIVYQDDAIVVVNKPAEFLSVPGVHVHDSVLTRLKAQFTQAEG----VFALHRLDMSTS 411
           +TIV++DD ++VVNK    LSV    V +     L +++ +       +F LHRLD  TS
Sbjct: 90  LTIVWEDDDLIVVNKKEGLLSVSSTRVKERTALHLLSEYVKKTDPRNKIFVLHRLDRDTS 149

Query: 412 GLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRPRQKV- 470
           GL++FA   +  K LQ  + S    + YVA++EG+  E   ++   +  +L +  + +V 
Sbjct: 150 GLMMFAKNLQVQKALQSNWNSAITARTYVAVVEGR-PEKDSDL---IVSNLTENAKMQVY 205

Query: 471 --CWQQGKPALTHWETVQVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGDDLYGL 528
                 GK A+T +  +      + + L   TGR +Q+R   A    +   I GD  YG 
Sbjct: 206 VTAEGDGKEAITRYRLLHSNGAYSLLELDLETGRKNQIR---AQMQSIGHSIAGDYKYGA 262

Query: 529 QDK---RLFLHAEQLSFAHPYTKQPMTFQ 554
           +     RL LHA +L+F HP T + M F+
Sbjct: 263 ETDPTGRLMLHARRLNFIHPVTGEEMHFE 291