Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., RluA family pseudouridine synthase from Parabacteroides merdae CL09T00C40

 Score = 95.1 bits (235), Expect = 4e-24
 Identities = 97/374 (25%), Positives = 154/374 (41%), Gaps = 86/374 (22%)

Query: 228 RIEQLKQQRKQRSAALQKKLFSAYRFTNIRG-----VEKDLVE-LFSVTKNPLPPAGSGE 281
           +++ L Q  +    A Q  L+  +RF   RG     V+K LV+ +F  T+N +  A    
Sbjct: 12  QVDDLLQPEEGEDKAPQ--LYEHFRFVADRGQSLLRVDKFLVDRMFGATRNRIQSAADAG 69

Query: 282 CAAPKLLHYAFQHQLRPIALAEFWWGRSPKSEIRQHKKFYPACQSKCQPILAHMLEGMPL 341
           C           ++++P  +      R P++                        E +P 
Sbjct: 70  CIMANGKPVKSNYRVKPEDVVTIMMTRPPRT-----------------------FEILP- 105

Query: 342 EDNPLLSNPAQGQDITIVYQDDAIVVVNKPAEFLSVPGVHVHDSVLTRLKAQFTQAEGVF 401
           E+ P          I IVY+DD ++VV+KPA  +  PG   +   L    A + + +  +
Sbjct: 106 ENIP----------IKIVYEDDDLLVVDKPAGLVVHPGHGNYTGTLVNALAWYLKDDPTY 155

Query: 402 --------ALHRLDMSTSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGE 453
                    +HR+D  TSGLLV A    A   L  QF  +  ++ Y AL+ G + E +G 
Sbjct: 156 DPNDPALGLVHRIDKDTSGLLVVAKKPEAKAHLSMQFFHKTTKREYRALVWGIVREDEGR 215

Query: 454 IQLPLCGDLDDRPRQKVCW------QQGKPALTHWETVQVEQNRTRVYLYPHTGRTHQLR 507
           I+    G++   PR ++         QGK A+TH+  ++     T V     TGRTHQ+R
Sbjct: 216 IE----GNIGRNPRDRMQMTVFPEGDQGKTAVTHYSVLERLGYVTLVKCRLETGRTHQIR 271

Query: 508 VHCAHHLGLNAPIVGDDLYGLQD---------------------KRLFLHAEQLSFAHPY 546
           VH  +   +   +  D+ YG  +                      R  LHA+ L F HP 
Sbjct: 272 VHMKY---IGHTLFNDERYGGNEILKGTTSSKYKQFVDNCFAICPRQALHAKTLGFVHPT 328

Query: 547 TKQPMTF--QVDAD 558
           T + M F  ++ AD
Sbjct: 329 TGEEMFFDSEIPAD 342