Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 217 a.a., ribosomal large subunit pseudouridine synthase A from Phaeobacter inhibens DSM 17395

 Score =  164 bits (414), Expect = 4e-45
 Identities = 93/210 (44%), Positives = 125/210 (59%), Gaps = 12/210 (5%)

Query: 356 ITIVYQDDAIVVVNKPAEFLSVPG--VHVHDSVLTRLKAQFTQAEGVFALHRLDMSTSGL 413
           + I++ D  ++VVNKP   LSVPG   H+ D +L+RL+A F +A     +HRLD  TSG+
Sbjct: 14  LDILHHDAQLLVVNKPHGLLSVPGRGEHLADCLLSRLQAAFPEA---LLVHRLDRDTSGV 70

Query: 414 LVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRPRQKVCWQ 473
           +VF +T  A + L  QF  R+ +K YVA ++G+L    G + LPL  D  +RPRQ VC  
Sbjct: 71  MVFGVTPHAQRHLSMQFEKRSAKKAYVARLDGRLEPRSGTVDLPLIVDWPNRPRQMVCHD 130

Query: 474 QGKPALTHWETVQVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGDDLY----GLQ 529
            GK A+T W  ++ E   TRV L P TGR+HQLRVH    L L   I+GD LY     L 
Sbjct: 131 TGKEAVTDWRVMKYEDTATRVRLTPKTGRSHQLRVHM---LSLGHAILGDPLYAEGRALD 187

Query: 530 DKRLFLHAEQLSFAHPYTKQPMTFQVDADF 559
             R+ LHAE+L   HP + + M F+V A F
Sbjct: 188 HPRMMLHAEELRIKHPDSGESMKFRVKAPF 217