Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., RNA pseudouridine synthase from Pseudomonas aeruginosa PA14

 Score =  133 bits (334), Expect = 7e-36
 Identities = 86/212 (40%), Positives = 120/212 (56%), Gaps = 14/212 (6%)

Query: 356 ITIVYQDDAIVVVNKPAEFLSVPGV--HVHDSVLTRLKAQ-FTQAEGVFALHRLDMSTSG 412
           I IV+QDDA++VV+KP   LSVPG      D ++TRL+   + +A  V   HRLD  TSG
Sbjct: 6   IRIVHQDDALLVVDKPTLLLSVPGRADDNKDCLVTRLQENGYPEARIV---HRLDWETSG 62

Query: 413 LLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRPRQKVCW 472
           L+V A    ++++L +QF  R  +K Y AL  G      G I+LPL  D   +PR  V +
Sbjct: 63  LMVLARDADSHRELSRQFHDRETEKAYTALCWGLPELDSGRIELPLRYDPPTKPRHVVDF 122

Query: 473 QQGKPALTHWETVQVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGDDLYGLQD-- 530
           + G+ ALT W  V+  +  +RV L P TGR+HQLRVH    L +  P++GD LY   +  
Sbjct: 123 EHGRHALTFWRVVERHERWSRVELTPITGRSHQLRVHM---LSIGHPLLGDRLYANPEAL 179

Query: 531 ---KRLFLHAEQLSFAHPYTKQPMTFQVDADF 559
              +RL LHA  L   HP + + + F+  A F
Sbjct: 180 AAHERLCLHASLLCLTHPQSGERLRFESPAPF 211