Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., pseudouridine synthase, RluA family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 99.4 bits (246), Expect = 3e-25
 Identities = 77/224 (34%), Positives = 110/224 (49%), Gaps = 31/224 (13%)

Query: 355 DITIVYQDDAIVVVNKPAEFLSVP------GVHVHDSV--LTRLKAQFTQAEGVFALHRL 406
           D+ ++Y+D AI V++KPA     P      G  VH  V     L AQ     G+  +HR+
Sbjct: 99  DLAVLYRDAAIAVLDKPAGLTVHPCPSCPEGTLVHRLVRHFPELAAQEGFRPGI--VHRI 156

Query: 407 DMSTSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRP 466
           D  TSGLL+ ALT     +L + F  R V K Y+AL+ G + + QGE++ P+      + 
Sbjct: 157 DKDTSGLLLVALTEAVRLELSRAFAERQVHKEYLALVHG-VPKAQGELEAPIGRHPLHKV 215

Query: 467 RQKVCWQQ--GKPALTHWETVQVEQNR--TRVYLYPHTGRTHQLRVHCAHHLGLNAPIVG 522
           +  V  +   GKPA + W  +  + +     V +   TGRTHQ+RVH AH   L  P+  
Sbjct: 216 KMAVVPENRGGKPARSAWRVLLADPDGRFALVAVRIFTGRTHQIRVHMAH---LGHPLWQ 272

Query: 523 DDLYGLQD-------------KRLFLHAEQLSFAHPYTKQPMTF 553
           D +YG  +              R  LHA +LSF HP T + M F
Sbjct: 273 DAVYGPSEAVAPAAGELPDFPPRQMLHAWRLSFRHPETDRDMHF 316