Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., pseudouridine synthase, RluA family from Marinobacter adhaerens HP15

 Score = 98.2 bits (243), Expect = 4e-25
 Identities = 74/235 (31%), Positives = 117/235 (49%), Gaps = 26/235 (11%)

Query: 342 EDNPLLSNPAQGQDITIVYQDDAIVVVNKPAEFLSVPGV-HVHDSVLTRLKAQFTQAEGV 400
           E    +S  A+   + IVY+D+ ++V+NKPA  +  P   H   +++  L     + E +
Sbjct: 71  EPEAQVSWQAEEISLDIVYEDEHLLVINKPAGLVVHPAAGHADGTLVNALLNYAPEVENL 130

Query: 401 ---FALHRLDMSTSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLP 457
                +HRLD  TSG++V A +  A+  L  Q  +R + + Y A++ G L+     +  P
Sbjct: 131 PRAGIVHRLDKDTSGIMVVARSLIAHTSLVDQLQTRTMGREYEAVVVGTLTGG-ATVDAP 189

Query: 458 LCGDLDDRPRQKVCWQQGKPALTHWETVQVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLN 517
           +     +R +  V    GKPA+TH+  V+     T V     +GRTHQ+RVH AH   + 
Sbjct: 190 IGRHPRERKKMAVV-ASGKPAVTHYRLVERFAAHTHVRCKLESGRTHQIRVHMAH---VK 245

Query: 518 APIVGDDLYG------------LQD-----KRLFLHAEQLSFAHPYTKQPMTFQV 555
            P+VGD LYG            L++      R  LHA QL+  HP T + +T++V
Sbjct: 246 HPLVGDPLYGGRLRLPKGTTDELREALSTFNRQALHARQLTLEHPETGEILTWEV 300