Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., tRNA pseudouridine(65) synthase TruC from Pantoea sp. MT58

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 74/233 (31%), Positives = 109/233 (46%), Gaps = 40/233 (17%)

Query: 356 ITIVYQDDAIVVVNKPAEFLSVPGVHVHDSVLTRLKAQFTQ-------AEGVFALHRLDM 408
           + I+YQD+ +V VNKP+ +L      VH S L R +  F          + VF  HRLD 
Sbjct: 2   LEILYQDEWLVAVNKPSGWL------VHRSWLDRHETVFVMQTVRDQIGQHVFTAHRLDK 55

Query: 409 STSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDD-RPR 467
            TSG+L+  L+    + L  QF    +QK Y A++ G L E+ G I  PL  +LD    +
Sbjct: 56  PTSGVLLMGLSSEVGRLLSLQFEQHQMQKTYHAVVRGWL-ESSGTIDYPLVEELDKIADK 114

Query: 468 QKVCWQQGKPALTHWETVQVEQ-----------NRTRVYLYPHTGRTHQLRVHCAHHLGL 516
                +  +PA+T ++++   +             + V + P TGR HQLR H +H   L
Sbjct: 115 HATEARTAQPAVTDYQSLATVEMPVGIGRYPTSRYSLVEMAPKTGRKHQLRRHMSH---L 171

Query: 517 NAPIVGDDLYG-----------LQDKRLFLHAEQLSFAHPYTKQPMTFQVDAD 558
             PI+GD  +G               RL LHA  L+  HP T +P+  +   D
Sbjct: 172 RHPIIGDSAHGDLRQNRGAAEHFGANRLMLHASSLALTHPVTGEPLLIRAGLD 224