Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., RNA pseudouridine synthase from Klebsiella michiganensis M5al

 Score =  132 bits (331), Expect = 2e-35
 Identities = 86/205 (41%), Positives = 115/205 (56%), Gaps = 20/205 (9%)

Query: 355 DITIVYQDDAIVVVNKPAEFLSVPGVHVH--DSVLTRLKAQFTQAEGVFALHRLDMSTSG 412
           +I I+YQD+ +++++KPA  LS+ G +    DSV  RL  QF    G    HRLD  TSG
Sbjct: 16  EIDILYQDEHLLLIDKPAGLLSLSGKNPRNLDSVHYRLVQQFP---GCALAHRLDFGTSG 72

Query: 413 LLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRPRQKVCW 472
           L+V A  +  N  L +QF  RAV K Y AL+ G L++ +G I  P+  D    P   +C 
Sbjct: 73  LMVIARNKVINAALCQQFSQRAVSKVYSALLCGHLADDEGTIDAPIAKDPALFPLMTICP 132

Query: 473 QQGKPALTHWETVQVEQNR-----TRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGDDLYG 527
           ++GKPA + +  V+  + +     TRV L P TGRTHQLR+HC     L  PI+G DLYG
Sbjct: 133 RRGKPARSGYRVVERLRYQDSVPVTRVQLTPETGRTHQLRIHCQQ---LGHPILGCDLYG 189

Query: 528 -------LQDKRLFLHAEQLSFAHP 545
                   Q  RL LHA +L F HP
Sbjct: 190 GLLLPGTEQAPRLMLHASELHFMHP 214