Pairwise Alignments

Query, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., Dual-specificity RNA pseudouridine synthase RluA from Enterobacter sp. TBS_079

 Score =  129 bits (324), Expect = 1e-34
 Identities = 87/223 (39%), Positives = 116/223 (52%), Gaps = 19/223 (8%)

Query: 350 PAQGQDITIVYQDDAIVVVNKPAEFLSVPGVHVH--DSVLTRLKAQFTQAEGVFALHRLD 407
           P    +I I++QD+ +V++NKP+  LS+ G +    DSV  RL   F    G   +HRLD
Sbjct: 11  PPCHDEIEILWQDEHLVLINKPSGLLSLSGKNPRNRDSVHYRLVQTFP---GCTLVHRLD 67

Query: 408 MSTSGLLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRPR 467
             TSGL+V A  +  N  L  QF  RAV+K Y AL+ G +   +G I  P+  D    P 
Sbjct: 68  FGTSGLMVIARNKAINAALCHQFSQRAVRKVYSALLCGHVENDEGVIDAPIAKDPALFPL 127

Query: 468 QKVCWQQGKPALTHWETV----QVEQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGD 523
             +C   GKPA + ++ V      E   TRV L P TGRTHQLR+HC     L  PI+G 
Sbjct: 128 MSICAITGKPARSRYQVVDRFYDAELPLTRVRLTPETGRTHQLRIHCQQ---LGYPILGC 184

Query: 524 DLYG-------LQDKRLFLHAEQLSFAHPYTKQPMTFQVDADF 559
           DLYG           RL LHA +L F HP + + +  +  A F
Sbjct: 185 DLYGGLALPGTEPIPRLMLHASELDFVHPVSAEAINARHAAPF 227